Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1581 ATGGCTTCTCCCATATTTCTAGTACTACTCTGTTTCATACTCTGTTTTTCACCTTCATCTCAAACAATTCTATTACCCTTAACACACTCAATCTCCAAAACCCAATTCAACAGTACTCACCACCTCCTCAAATCAACCTCAACCCGTTCAAAAACACGTTTCCACCACCAACACAACAAACACCAAACCCAAGTTTCTCTCCCTCTTGCTCCAGGAAGTGATTACACACTTTCCTTCAACCTAGGTTCAAACCCTCCACAACTCATAACTCTCTACATGGACACAGGTAGCGACCTTGTTTGGTTCCCTTGTTCACCTTTCGAATGCATCCTCTGTGAAGGAAAACCACTAACAACAAAACCAGCAAACATCACAAAACAAACACACTCTGTTTCTTGTCAATCCCCTGCATGTTCCGCAGCACATTCAACCATGTCTTCAAGTAACCTCTGTGCTATTTCACGTTGTCCTTTAGACTTCATAGAAACTTCTGATTGTTCTTCCTTTTCTTGTCCACCTTTTTACTATGCTTATGGTGATGGAAGCTTCATAGCTAATCTCTATCAACAAACACTTTCTCTATCTTCTCTTTATCTTCAAAATTTCACGTTTGGTTGTGCTCATACTGCACTTGCTGAACCCACCGGCGTAGCTGGTTTTGGCCGTGGAATTTTGTCTCTTCCGGCACAGCTTTCTACTCTTTCACCTCATTTGGGAAACCGTTTTTCTTATTGTTTAGTTTCTCACTCTTTCGACGGTGACAAAGTCCTCCGACCGAGTCCACTGATTCTCGGTCGCCACGATGATGATGTCACCGTCGGAGAACAATCTGTTGAGTTTATCTACACTTCCATGCTTTCAAACCCAAAGCATCCTTATTACTACTGCGTTGGACTCGCCGGAATATCCGTCGGAAAAAGAACAGTGCCGGCGCCGGAGATTCTCAAAAGGGTCGATGGAAAAGGTAACGGTGGAATGGTTGTTGATTCAGGAACAACGTTTACGATGTTACCAGAGAGTTTTTACAACGCGGTGGTTACTGAGTTTGATAAACGAGTTAACCGATTTCATAAACGAGCGAGTGAGATAGAAACTAAAACGGGTCTTGGACCGTGTTATTATTTAAACGGGTTATCTCAAATACCGGTGTTGAAGTTGCATTTTGTTGGGAATAATTCGGGTGTGGTGTTGCCTAGGAAGAATTATTTTTATGAGTTTATGGACGGTGGTGATGGAGTGAGAAGGAAAGGGAAAGTGGGGTGTCTGATGCTGATGAACGGTGGAGATGAAACTGAGTTGGATGGAGGACCTGGTGCGACTCTAGGGAATTATCAACAGCAAGGGTTTGAGGTGGTTTATGATTTGGAGAAAGAGCGCGTGGGGTTTGCGAAGAAAGAGTGCGCGTTGCTTTGGGATAGCCTCAACAGTGAGAAAAACTAG 1440 0.4354 MASPIFLVLLCFILCFSPSSQTILLPLTHSISKTQFNSTHHLLKSTSTRSKTRFHHQHNKHQTQVSLPLAPGSDYTLSFNLGSNPPQLITLYMDTGSDLVWFPCSPFECILCEGKPLTTKPANITKQTHSVSCQSPACSAAHSTMSSSNLCAISRCPLDFIETSDCSSFSCPPFYYAYGDGSFIANLYQQTLSLSSLYLQNFTFGCAHTALAEPTGVAGFGRGILSLPAQLSTLSPHLGNRFSYCLVSHSFDGDKVLRPSPLILGRHDDDVTVGEQSVEFIYTSMLSNPKHPYYYCVGLAGISVGKRTVPAPEILKRVDGKGNGGMVVDSGTTFTMLPESFYNAVVTEFDKRVNRFHKRASEIETKTGLGPCYYLNGLSQIPVLKLHFVGNNSGVVLPRKNYFYEFMDGGDGVRRKGKVGCLMLMNGGDETELDGGPGATLGNYQQQGFEVVYDLEKERVGFAKKECALLWDSLNSEKN* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1581 479 ProSiteProfiles Peptidase family A1 domain profile. 75 463 IPR033121 -
Mal6g1581 479 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 326 337 IPR001969 GO:0004190|GO:0006508
Mal6g1581 479 CDD pepsin_A_like_plant 75 467 IPR034161 -
Mal6g1581 479 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 476 - -
Mal6g1581 479 PANTHER ASPARTYL PROTEASES 4 476 IPR001461 GO:0004190|GO:0006508
Mal6g1581 479 Pfam Xylanase inhibitor C-terminal 295 463 IPR032799 -
Mal6g1581 479 SUPERFAMILY Acid proteases 70 472 IPR021109 -
Mal6g1581 479 Gene3D Acid Proteases 271 471 IPR021109 -
Mal6g1581 479 Pfam Xylanase inhibitor N-terminal 75 250 IPR032861 -
Mal6g1581 479 Gene3D Acid Proteases 32 257 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1581 Mal-Chr6 29110258 29111697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1581 50 470 Miscellaneous Gene Families AT1G77480 24.777 1.70e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1581 - - gmx:100807884 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1581 6 29110258 29111697 Mal6g1581 6 29110258 29111697 ECH
Mal6g1581 6 29110258 29111697 Mal5g3864 5 107654973 107656427 PCT