Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3864 ATGGCTTCTCCCCTGTTTTTAAGGTTGCTCCTCCTCATTATACTCTCCCTTTTACACCCTTCATCTCAAATGCTACTATTACCCCTAACACACTCACTCTCCCAAATACAATTCAACACCACCCACCACCTCCTCAAATCAACCTCTACTCATTCCTTATCACGCTTCCACCGCTACAAACACCACCACAACCAACTCTCTCTCCCACTCTCACCAGGCTCCGACTACACTCTCTCCTTCAACCTCGGCCCCCACTCCCAACCCATAACTCTCTACATGGACACAGGAAGCGACCTTGTCTGGTTCCCATGCACCCCTTTCAACTGCATACTCTGCGAACTCAAACCCAACCCTTCATCTCCTTCTCCCCCAACCAACATCTCCCATAGCACCCCCATTTCATGCAACTCCCATGCATGCTCTGCAGCACATAGCTCCACCCCCTCTTCCGATCTCTGCACAATGGCTCGTTGCCCATTAGACTCCATTGAAACCAAAGACTGCGGTTCATTTCACTGTCCACCCTTTTACTATGCTTACGGTGATGGAAGCTTAATAGCTTCTCTCTATCGTGATACACTCTCTCTTTCTTCACTTCAACTTACAAACTTCACATTCGGTTGTGCTCATACAGCTTTTTCCGAACCCACCGGCGTCGCTGGGTTCGGTCGTGGATTACTCTCTCTACCTGTTCAGTTAGCATCTCACTCTCCTCAACTTGGTAACCGTTTCTCTTATTGCTTAGTTTCTCATTCTTTTCGTTCTGAACGAGTTCGGAAACCGAGTCCACTTATATTGGGTCGTTATGATGATGAAAAACAGAGCAATGGTGCTGGTGGTGAAGTTGTTGAGTTTGTTTACACTTCAATGCTTGAGAATCCAAAACATCCTTATTATTACTGTGTTGGGTTGAAAGGAATCTCCGTCGGAAAAAAGACAGTTCCGGCACCGGAGATTTTACGGAGGGTAAATAAGAGAGGTAACGGCGGTGTAGTTGTAGATTCCGGCACCACGTTTACTATGTTGCCGGAGAAATTTTATAACTCGGTGGTGGAAGAGTTTGACCGCCGTGTCGGGAAAGTCAACCGGCGTGCTCGTGAGATTGAACAGAAAACTGGGCTTTCGCCGTGTTATTATTTAAACGCGGCGGCGATAGTGCCGGCGGTGACGCTGCGTTTTGTTGGGGTGAATTCAAGTGTGGTGTTGCCTAGGAAGAATTATTTTTACGATTTTTTGGACGGTGGGGATGGAGTGAGGAGGAAAGGGAGATTAGGGTGTTTGATGTTAATGAACGGTGGAGATGAAGCTGAAGTGAGTGGTGGGCCCGGGGGAGTACTTGGGAATTATCAACAGCAGGGATTTGAAGTCGAGTATGATCTTGAAAAGAAGCGCGTGGGGTTTGCCAAGAGAAAGTGCGCGTTGCTTTGGGATAGGCTCAATCGCGACAAAAACTAG 1455 0.477 MASPLFLRLLLLIILSLLHPSSQMLLLPLTHSLSQIQFNTTHHLLKSTSTHSLSRFHRYKHHHNQLSLPLSPGSDYTLSFNLGPHSQPITLYMDTGSDLVWFPCTPFNCILCELKPNPSSPSPPTNISHSTPISCNSHACSAAHSSTPSSDLCTMARCPLDSIETKDCGSFHCPPFYYAYGDGSLIASLYRDTLSLSSLQLTNFTFGCAHTAFSEPTGVAGFGRGLLSLPVQLASHSPQLGNRFSYCLVSHSFRSERVRKPSPLILGRYDDEKQSNGAGGEVVEFVYTSMLENPKHPYYYCVGLKGISVGKKTVPAPEILRRVNKRGNGGVVVDSGTTFTMLPEKFYNSVVEEFDRRVGKVNRRAREIEQKTGLSPCYYLNAAAIVPAVTLRFVGVNSSVVLPRKNYFYDFLDGGDGVRRKGRLGCLMLMNGGDEAEVSGGPGGVLGNYQQQGFEVEYDLEKKRVGFAKRKCALLWDRLNRDKN* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3864 484 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 331 342 IPR001969 GO:0004190|GO:0006508
Mal5g3864 484 Pfam Xylanase inhibitor C-terminal 300 468 IPR032799 -
Mal5g3864 484 SUPERFAMILY Acid proteases 71 477 IPR021109 -
Mal5g3864 484 CDD pepsin_A_like_plant 76 472 IPR034161 -
Mal5g3864 484 Coils Coil 351 371 - -
Mal5g3864 484 ProSiteProfiles Peptidase family A1 domain profile. 76 468 IPR033121 -
Mal5g3864 484 Pfam Xylanase inhibitor N-terminal 76 267 IPR032861 -
Mal5g3864 484 Gene3D Acid Proteases 63 267 IPR021109 -
Mal5g3864 484 PANTHER BNAA01G17170D PROTEIN 1 477 - -
Mal5g3864 484 Gene3D Acid Proteases 282 474 IPR021109 -
Mal5g3864 484 PANTHER OS07G0603500 PROTEIN-RELATED 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3864 Mal-Chr5 107654973 107656427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3864 76 475 Miscellaneous Gene Families AT1G44130 24.641 7.48e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3864 - - gmx:100805699 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3864 5 107654973 107656427 Mal5g3864 5 107654973 107656427 ECH
Mal6g1581 6 29110258 29111697 Mal5g3864 5 107654973 107656427 PCT