Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1517 ATGACTGCAACTTCTCTCATCACTATTAGTCCCGACGAGCTCAGGTTTCATTTTGAGCTGGAAAAGCAAACATTTTGTGATCTTAAAGTCCTGAATAACACTGAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCACCAAAGAAGTACTTTGTACGACCAAACACTGGGGTTATACATCCTTGGGACTCATGTATCATCAGAGTCACCCTTCAAGCTCAACGCGAATACCCTCCAGATATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGAGTCCAAATACTGATATTGATGATCTTCCGGCAAATACGTTTAATAAGGATAGTGGTAATTCAATAGAAGATTTGAAACTAAGAGTCGCATATATCACTCCCACTTCACCCGAAGGAAGCTCTGAGGATGATGCAGCAAAGAACTCTGCAAAGCTCGACACCTCTTCCGCTATACAGCTCCTGAAGGAAGAAAGAGAGGCCGCTGCCAGACAAACGCGACAGCTTCAACAGGAACTGGACATGCTGAAAAGGCGAAGAAACCAAAGAGGCGATCCTGGCTTTTCCTTCACCTTCGCCATTTTTGTTGGTCTCCTTGGATTTTTGCTTGGCTTTCTTATGAAATTTTTATTCTCTTCACCATCTACAGAATAA 654 0.4205 MTATSLITISPDELRFHFELEKQTFCDLKVLNNTENYVAFKVKTTSPKKYFVRPNTGVIHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVSPNTDIDDLPANTFNKDSGNSIEDLKLRVAYITPTSPEGSSEDDAAKNSAKLDTSSAIQLLKEEREAAARQTRQLQQELDMLKRRRNQRGDPGFSFTFAIFVGLLGFLLGFLMKFLFSSPSTE* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1517 217 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 214 IPR016763 GO:0005789
Mal6g1517 217 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Mal6g1517 217 PIRSF VAMP_assoc_prot 1 154 IPR016763 GO:0005789
Mal6g1517 217 PIRSF VAMP_assoc_prot 139 209 IPR016763 GO:0005789
Mal6g1517 217 Coils Coil 152 179 - -
Mal6g1517 217 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 214 - -
Mal6g1517 217 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Mal6g1517 217 Gene3D Immunoglobulins 2 130 IPR013783 -
Mal6g1517 217 SUPERFAMILY PapD-like 4 136 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1517 Mal-Chr6 28270898 28275100 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1517 - - gmx:100794270 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3866 5 107663508 107667423 Mal6g1517 6 28270898 28275100 PCT