Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3866 ATGAGTTCCGGTGACCTCCTCAGCATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACTGATAGCTATGTAGCTTTCAAGGTGAAAACAACCAATCCAAGGAAGTATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCAAGATCTACCTGCGATGTTATGGTTACCATGCAAGCGCAAAAGGAAGCTCCAGCTGAAATGCAATGCAAGGACAAGTTTCTTCTTCAGAGCGTAAAAACCAACGATGGTGTCAGTCCGAAAGATATCTCTGCAGACATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAGTTGAGAGTGGTGTATGTCTCTCCGCCACAACCACCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCACCTAGAGGTTCTGTTTCAGAAAATGGAAATGCCAACGGTCCTGAATTCGCACAAGTAACAAGAGGATCTGCTGAACGACCTGCGGCTCAAGACAAATCTGCAGAGGTAAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAACTAGCAGGCTCCGCCAGGAACTGGAGCTGCTGAAGCGTGAAGGCAACAAAAATCGTGGTGGAGTGTCATTTATCATTGTCATATTAATCGGCTTACTTGGCATAATCATGGGGTATCTCATGAAGAAGACCTAA 726 0.4559 MSSGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPAEMQCKDKFLLQSVKTNDGVSPKDISADMFNKEAGHVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGPEFAQVTRGSAERPAAQDKSAEVRALISRLTEEKNNAIQQTSRLRQELELLKREGNKNRGGVSFIIVILIGLLGIIMGYLMKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3866 241 MobiDBLite consensus disorder prediction 127 177 - -
Mal5g3866 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Mal5g3866 241 MobiDBLite consensus disorder prediction 143 161 - -
Mal5g3866 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Mal5g3866 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Mal5g3866 241 Coils Coil 177 211 - -
Mal5g3866 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Mal5g3866 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Mal5g3866 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Mal5g3866 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3866 Mal-Chr5 107663508 107667423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3866 - - gmx:100527687 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3866 5 107663508 107667423 Mal5g3866 5 107663508 107667423 ECH
Mal6g1584 6 29194885 29198656 Mal5g3866 5 107663508 107667423 PCT
Mal5g3866 5 107663508 107667423 Mal6g1517 6 28270898 28275100 PCT