Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1132 ATGAAGAGAACTCGATCTCAAATCAACTCCATCCCAAATCCACAACCCCCAATCATCAAAACCCTAATCTCCTCAAAAATCCCCTTCCCCGCCAAAAAAATCCCAAAACCCTCCCTCAAAATCAAACAAGTCAAAGAAGAATCAACACCACCAACCCCAAAACCATTATCATCACAAACCGAACTCGCCGCCGCACTCAACCACCTCCGCGCCGCCGATCCACTCCTCTCCACCATCATCAACACCTTCCCTTCACCCCAATTCTCAACCACCATCACACCCTTCTTCTCTCTCATCAAAAGCATAATCTCCCAACAACTCTCCAACAAAGCAGCATCATCAATCTCATCACGTTTCATCTCTCTCTTTCCAAACCAATCTTCAATAATCCCAACCGCCGTCTTATCCCTTTCCCCAGAGGATCTCCGCCGCGTCGGAATCTCAGCACGAAAAGCATCTTACATTCAGGACCTTTCAACGAAATACGCTGATGGATTTCTGTCGGATTCATCGATTCTTGAAATGGACGATGAAACGCTTTATGAGAAACTAACGTCGGTTAAGGGAATTGGACCTTGGTCGGTTCATATGTTTATGATTTTCACACTTCATCGTCCTGATGTTTTACCTGTTGGTGATCTTGTTGTGAGGAGAGGTGTGGAGAAATTGTATGGTCTTAAATGTTTGCCTTCTCCTGAAAAAATGGAGGGTTTGTGTGAGAAATGGAAGCCTTATAGATCTGTTGGCTCTTGGTATATGTATAGGTTTGTTGAAGCTAAAGGGGTTTTACCAATTGCTGCTACTACTAACACTCTTTGTTAA 822 0.4404 MKRTRSQINSIPNPQPPIIKTLISSKIPFPAKKIPKPSLKIKQVKEESTPPTPKPLSSQTELAAALNHLRAADPLLSTIINTFPSPQFSTTITPFFSLIKSIISQQLSNKAASSISSRFISLFPNQSSIIPTAVLSLSPEDLRRVGISARKASYIQDLSTKYADGFLSDSSILEMDDETLYEKLTSVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLYGLKCLPSPEKMEGLCEKWKPYRSVGSWYMYRFVEAKGVLPIAATTNTLC* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1132 273 Gene3D Hypothetical protein; domain 2 92 205 - -
Mal6g1132 273 Gene3D - 67 255 - -
Mal6g1132 273 CDD ENDO3c 98 256 IPR003265 GO:0006284
Mal6g1132 273 SMART endo3end 103 258 IPR003265 GO:0006284
Mal6g1132 273 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 3 268 - -
Mal6g1132 273 SUPERFAMILY DNA-glycosylase 89 256 IPR011257 GO:0003824|GO:0006281
Mal6g1132 273 Pfam HhH-GPD superfamily base excision DNA repair protein 99 243 IPR003265 GO:0006284
Mal6g1132 273 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 3 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1132 Mal-Chr6 17323216 17324037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1132 K01247 - tcc:18610919 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0565 2 6529881 6533010 Mal6g1132 6 17323216 17324037 ECH
Mal6g1132 6 17323216 17324037 Mal6g1132 6 17323216 17324037 ECH