Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0565 ATGGGCGAAGACACACAACAACAACTTCAACCACAATCCCTAACCGGAACACAAATTGAACCCCAACAACCACAAGGGGCTTCTTCCGACAACACTATCTCCGCCACCACCGCCGTCGACTCTGTCGACACAATTATCCCCGTAGAATCCGAACTGAGCAATGTTCCACCACACACCAATGCCCCCGCCACAAAAATCCCTCTCCGTCCTCGTAAGATCCGGAAAATCTCACCCGACCCATCAACCTCCGAATCACAAACCGAAACCCTAAAACCAGCCAATTCCACCGCCGCCGGAAAATCCAACGGACGGAACAACAAAGCGGTTCAGCCACAACGAACCCTAGCTGCTCCTAGAATCGTAGCTAGGTCACTTTCGTGCGAAGGTGAAGTTGAAATCGCAATTCGTTACCTTCGTACCGCAGACCCACTCTTATCACCTCTCTTCGATATCCATCAACCACCAACATTCGATAATTTCCATACCCCATTCCTTGCCCTAACTCGTAGCATCTTGTATCAACAACTCGCGTTTAAGGCAGGAACATCGATTTATACGCGATTTATTGCTCTATGTGGTGGTGAGGTTGGTGTTGTTCCTGATACTGTTCTTGCCCTAAGTGCTCAACAGCTTCGTCAAATTGGGGTTTCTGGGAGGAAAGCTAGTTATCTTCATGATTTGGCTAGGAAGTATCAGAATGGGATACTTTCCGATTCAGCTATTGTAAATATGGATGATAAGTCGCTTTTCACCATGCTTACTATGGTTAATGGGATTGGTTCTTGGTCTGTTCATATGTTTATGATTTTCTCCCTGCATAGACCGGATGTGCTTCCGATTAATGATCTTGGTGTTCGGAAAGGGGTTCAGATTCTTTACAATCTTGATGAATTGCCTAGGCCGTCTCAGATGGATCAATTGTGTGAGAAGTGGAGGCCTTATAGGTCGGTTGCTTCGTGGTATATGTGGAGGTTTGTTGAAGCTAGGGGGACTCCTTCGACTGCAGTGGCTGTTGCCACTGGTGCCGGCTTGGAGCAGCACCAGATGGAGCATCAGCAACAGCAACATCAACAGATTATGGATCCCATGAATAACATGTTTAATATCGGGGCTGCCTGTGCTTGGGGACAGTGA 1134 0.4753 MGEDTQQQLQPQSLTGTQIEPQQPQGASSDNTISATTAVDSVDTIIPVESELSNVPPHTNAPATKIPLRPRKIRKISPDPSTSESQTETLKPANSTAAGKSNGRNNKAVQPQRTLAAPRIVARSLSCEGEVEIAIRYLRTADPLLSPLFDIHQPPTFDNFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEVGVVPDTVLALSAQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQILYNLDELPRPSQMDQLCEKWRPYRSVASWYMWRFVEARGTPSTAVAVATGAGLEQHQMEHQQQQHQQIMDPMNNMFNIGAACAWGQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0565 377 PANTHER BNAC05G15000D PROTEIN 1 371 - -
Mal2g0565 377 Pfam HhH-GPD superfamily base excision DNA repair protein 169 312 IPR003265 GO:0006284
Mal2g0565 377 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 371 - -
Mal2g0565 377 Gene3D Hypothetical protein; domain 2 161 274 - -
Mal2g0565 377 CDD ENDO3c 164 325 IPR003265 GO:0006284
Mal2g0565 377 SMART endo3end 172 327 IPR003265 GO:0006284
Mal2g0565 377 SUPERFAMILY DNA-glycosylase 153 325 IPR011257 GO:0003824|GO:0006281
Mal2g0565 377 MobiDBLite consensus disorder prediction 1 112 - -
Mal2g0565 377 MobiDBLite consensus disorder prediction 1 43 - -
Mal2g0565 377 Gene3D - 137 324 - -
Mal2g0565 377 MobiDBLite consensus disorder prediction 79 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0565 Mal-Chr2 6529881 6533010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0565 K01247 - gmx:100790760 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0565 2 6529881 6533010 Mal6g1132 6 17323216 17324037 ECH
Mal2g0565 2 6529881 6533010 Mal2g0565 2 6529881 6533010 ECH