Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g1013 ATGACTCTATTGTTACATAACCGACATTATCCTCAACCCTTCTTATGCTTCTTACTCTTTCTCATTTTCAAAGGGGTTTCAGTTTCAGGGGCAACATTTGCATTTCTGAACAAGTGTGATTACACAGTATGGCCAGGAATTTATGGAAAACCGGAACTCGGAACAACTGGTTTTGAACTCGCAAAAGGAACTTCCAGAACTTTCCAAGCACCAACCGGCTGGTCAGGTAGATTCTGGGGACGAACCGGTTGCCAATTCGATGGCTCGGGCCACGGAACTTGCTCCACCGCTGATTGCGGCTCTGGCGAAATTTCCTGCAATGGCGCCACAGCCTCACCGCCGGCAACTCTAGCTGAATTCACACTTGGAACCGGTTCAATGGACTTCTACGACGTAAGCCTAGTTGACGGTTACAATCTTCCGATGTTGGTTACCACGAGTGGCGGTACAGGGCCATGTGACGTTACAGGTTGTAGTTCGGATCTTAATAAGAAATGTCCGTCAGAGTTGAAGGTGGATGGTGGCGGCGCGTGTAATAGTGCTTGTGGCGCGTTTGGGAAACCGGAATATTGTTGTAACGGCGCGTTTAGTAACCCTGACACGTGTAAACCTTCAGTGTATTCACAAATGTTCAAATCTGAGTGTCCTAAATCTTATAGCTACGCTTATGATGATGCAACTAGCACTTTTACTTGTTCTAATGCTGATTATACAATCACATTTTGTCCTTCTACTTCACCTAGCCTAAAGTCTGCAGCAGATTCATCTACTAAAAATCCGAAGGAAACGGATGATAATTCAGCTTCGGGAGCTGGCTCGGGTGAATCAGAAATGGCTTCAGCTTCATATCTAGCTGATATGGCTACAGCTTCTGGGGCTTCTACTAGAAGCAGAATTTCAATTGTTTCTTTATTGTTGGTGGTGGTTGGTTTCATTTTTACTATTTTTTATTTTTAG 957 0.4462 MTLLLHNRHYPQPFLCFLLFLIFKGVSVSGATFAFLNKCDYTVWPGIYGKPELGTTGFELAKGTSRTFQAPTGWSGRFWGRTGCQFDGSGHGTCSTADCGSGEISCNGATASPPATLAEFTLGTGSMDFYDVSLVDGYNLPMLVTTSGGTGPCDVTGCSSDLNKKCPSELKVDGGGACNSACGAFGKPEYCCNGAFSNPDTCKPSVYSQMFKSECPKSYSYAYDDATSTFTCSNADYTITFCPSTSPSLKSAADSSTKNPKETDDNSASGAGSGESEMASASYLADMATASGASTRSRISIVSLLLVVVGFIFTIFYF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g1013 318 PANTHER OS03G0233200 PROTEIN 21 262 IPR001938 -
Mal6g1013 318 Pfam Thaumatin family 37 243 IPR001938 -
Mal6g1013 318 Gene3D Thaumatin 31 243 IPR037176 -
Mal6g1013 318 CDD TLP-PA 32 242 - -
Mal6g1013 318 PANTHER THAUMATIN-LIKE PROTEIN 1 21 262 - -
Mal6g1013 318 MobiDBLite consensus disorder prediction 251 275 - -
Mal6g1013 318 ProSiteProfiles Thaumatin family profile. 30 243 IPR001938 -
Mal6g1013 318 SMART tha2 33 243 IPR001938 -
Mal6g1013 318 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Mal6g1013 318 SUPERFAMILY Osmotin, thaumatin-like protein 31 244 IPR037176 -
Mal6g1013 318 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Mal6g1013 318 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Mal6g1013 318 PRINTS Pathogenesis-related protein signature 90 119 IPR001938 -
Mal6g1013 318 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Mal6g1013 318 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Mal6g1013 318 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g1013 Mal-Chr6 15130815 15132147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g1013 18 262 Receptor kinase-like Gene Family AT5G38280 47.126 5.15e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g1013 - - gmx:100815652 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g1013 6 15130815 15132147 Mal6g1013 6 15130815 15132147 ECH
Mal6g1013 6 15130815 15132147 Mal5g3327 5 96736910 96738286 ECH