Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0927 ATGACACAAGACCTGGTTGAGTGCTCTAAGGGCTTACACCCTTTGACACCAATTAGTTTCCTAGAAAGAGCAGCCACTGTGTATGGTGACAAGGTTTCCATCATCTACAATGATCATGTTAGATTTTCTTGGAGACAAACCTATGAAAGATGCATCAAGCTTGCTTCTGCTTTGGTCAACTTAGGAATTTCTAATGGTGATATTGTTGCAACTTTGGCACCAAATACTCCAGCACACTATGAGCTTCATTTTGGTGTACCAATGGCAGGTGCTGTTATTTCTGCATTCAATCTCAAACTAGATGAAACAACATTAGCACTAATATTGGAACAATTAGAGTCTTGTAAAATCATATTTGTAGACTATGAATTTTTTGACTCTGCCATCAAAGCATCACAAATAATCTCTCAAAGAAATTTCAAGCCACCCCTTATTGTCCTAATACAAGATTATGACCAATTAGTGAAAGATATACCTCAAGGTACCTTAATCTACAATGAACTTCTTGAAAAGGGACAAAAAGATTTTAAGATTTCAATGCCTAGGAATGAATGTGATCCTATTTCAGTGAATTACACATCAGGCTCAACAGGAATTCCAAAAGGAGCTGTTTATAGTCATAGAAGTGTCTACCTTAATTCACTCGCAACGATTACTCGTTTTGACGTGAATCCTATGCCGGTATTTTTATGGACAGTTGACATGTTTAGATGCAATGGATGGTGCTTCATTTGGTCAATGCCTGCTCTTGGTGGCACAAACATTTGTCTTGGAAATAATTTTTCAGCAAAAGATATTTTTGATGCAATTCATGTTCATAAGGTAACACATTTGTGTGGTGCACCTACCCTTTTGGAAATTATTGCAAATTGTGACATTGTTAGGCCTTTTTCTCATAAGGTGAGTGTCACAGTTGCTGGTATATTACCATCATTCAAAATTCTTAACAAGGTGGCAGAGCTTGGATTTGATGTGAATATTGGTTATGGTATGACTGAAGCATTAGGTCCAGTTGTTGTAAGAAAGTGGAAACAAAATTTTGATGATGATATTACAAAACTAAATTATGTTCATAAAAAAGGGGTTATAGACTTTATGATGGTTGAAGTTGATGTGAAAGATCCAAATACAATGAAGAGTGTTCCTTATGATGGAAAAACCATAGGTGAAATTATGTTTAAAGGGAATACTTTAATGTCAGGGTACCATAAGAATTCACAAGTGAGTGATGAAGCTTTTAGGGATGGTTGGTATAGGACTAGGGACCTAGGTGTTAGGTTACCTAATGGTTCTATTAATTTGAAAGATAGAGCAAAAGATATTATTTATTCTAAGGGTGAGTTTGTGAGTTCATTAGAGGTGGAAGCTGTTTTGTTGAATCATCCAATGGTTTTGAAAGTAGCTGTTGTGGGGAGATATGATGATGATGAGTGTTTGGTTGAGTCACCTTGTGCAATTGTGAAATTGAAAGATGGATGTAGTGTTAATGTTGAAGATATTATCAAGTTTTGTGAAGATCAAGTGGATGCTCATATGGTTCCTAAGAGTGTGGTGTTTGGTGATTTGCCTCTCAATTCAACTGGTAAGGTACAAAAGTTTGTTATTAGAGAAAATATTAAAAGTATTGGGTGGTGTGACTCAATTAATTAA 1650 0.357 MTQDLVECSKGLHPLTPISFLERAATVYGDKVSIIYNDHVRFSWRQTYERCIKLASALVNLGISNGDIVATLAPNTPAHYELHFGVPMAGAVISAFNLKLDETTLALILEQLESCKIIFVDYEFFDSAIKASQIISQRNFKPPLIVLIQDYDQLVKDIPQGTLIYNELLEKGQKDFKISMPRNECDPISVNYTSGSTGIPKGAVYSHRSVYLNSLATITRFDVNPMPVFLWTVDMFRCNGWCFIWSMPALGGTNICLGNNFSAKDIFDAIHVHKVTHLCGAPTLLEIIANCDIVRPFSHKVSVTVAGILPSFKILNKVAELGFDVNIGYGMTEALGPVVVRKWKQNFDDDITKLNYVHKKGVIDFMMVEVDVKDPNTMKSVPYDGKTIGEIMFKGNTLMSGYHKNSQVSDEAFRDGWYRTRDLGVRLPNGSINLKDRAKDIIYSKGEFVSSLEVEAVLLNHPMVLKVAVVGRYDDDECLVESPCAIVKLKDGCSVNVEDIIKFCEDQVDAHMVPKSVVFGDLPLNSTGKVQKFVIRENIKSIGWCDSIN* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0927 549 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Mal6g0927 549 Gene3D - 439 542 IPR045851 -
Mal6g0927 549 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 23 541 - -
Mal6g0927 549 SUPERFAMILY Acetyl-CoA synthetase-like 10 539 - -
Mal6g0927 549 Pfam AMP-binding enzyme 21 443 IPR000873 -
Mal6g0927 549 Pfam AMP-binding enzyme C-terminal domain 453 529 IPR025110 -
Mal6g0927 549 PANTHER ACYL-ACTIVATING ENZYME 23 541 - -
Mal6g0927 549 CDD ttLC_FACS_AEE21_like 13 537 - -
Mal6g0927 549 Gene3D - 5 438 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0927 Mal-Chr6 13999804 14005267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0927 4 543 Miscellaneous Gene Families AT3G16910 41.324 1.17e-146 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0927 - - lang:109330780 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0927 6 13999804 14005267 Mal5g3253 5 95561566 95571254 PCT