Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3253 ATGGCATCCATTTTCCCATTCTCAAATGCTCTTGGAAATGCACCATTTCATCACACATTTCATAAATATCAAGCACATGTCATTTTATCCAAACATACAGCTGCATGTAGACAACAAAGAATGAAGACAAAGAGAATTACTTTCATCAACTCAGATCAAAAGGAAGAGCCACATTTGCATAAGCAGAGCCAAAATGGAAGAACAGGACCACAAGACATTAAGGTTGCTACACTTGCACCTAATGTCCCTGCAATGTATGAGCTGCAATTCGCAGTACCAATGGCCGGAGCCATTCTTTGTACTCTTAATTCACGCCTAGATGCAAATATGGTTTCAGTCCTATTGGAGCATTCACAAGCAAAGATTCTTTTTGTAGACTACCAACTACTCGAAATCGCTCGAGAAGCATTGGACCTCCTAGCCAAAAGAGCGAAAAAGAAGCCAATTTTAGTCATGATCATGGACTCTGATTGCACATCTACTATTGACACTACTTCCATTAGTTATGAATATGAAAAACTTGTAGCTATTGGACAAAATGATTTTGAAATTGTGAGGCCACATAGTGAATTAGATCCCATAAGTATAAATTACACTTCTGGCACTACATCTAGGCCTAAAGGAGTTGTCTTCAGTCATAGAAGTGCTTATCTAAACTCTCTAGCCACAGTTCTACTCTTACAAATGAGCTTATTTCCTGTTTATCTTTGGAATGTTCCATTGTTTCATGCTAATGGTTGGTGCCTAGCTTGGGGAGTTGCAGCACAATTTGGAACCAATGTTTGTCTAAGGAAAGTCTCTCCAAAGAACATATTTGACAATATAATTAAGCATAAAGTAACATACATGGGAGGCGCTCCTACCGTTTTGAACATGATCGCGAATTCTACATTGGCCGATAGGAAACAACTCAATCACAAGGTAGCGGTGTTAACAGGAGGTTCCCCTCCACCACCGCAGATCCTTTCGATGATGGAAGAAAATGGTTTTAATATTACTCACATGTATGGCCTCACAGAAACATGTGGTGCAGGGACTTTTTGTGCTTGGAGACCTGAATGGGACATGCTACCGCCCGAAGAAAAATCAAAGATGAAAGCTAGACAAGGTGTGCCACATGTAGGGATGGAGGAAATCGATGTCAAAGATCCTTCAACAATGGAAAGTGTTCCGGCTGATGGAAAAACGGTTGGCGAGGTAATGTTTAGAGGGAATACAATGATGAGTGGTTATTTTAATGATTTGAAAGCAACAGAAGAAGCTTTCAAAGATGGTTGGTTTCATAGTGGTGATCTTGCTGTGAAACATTCGGATGGTTACATTGAAATCAAGGACCGGTTGAAGGACATAATAGTATCCGGGGGAGAAAACATCAGCTCGATTGAGGTAGAAACGGTTTTGTATAGCCATCCAGCGGTCCTTGAGGCTGCGGTTGTTGCTAGACCTGATGATCTATGGGGCCAAACTCCTTGTGCATATCTGAAATTGAAAGACGGGTTTGATGCAGATGTTCAAGAAATAATAAACTTTTGCAGGGATCGTTTGCCGCATTTCATGGCTCCTAAAACAGTCATTTTTCTAGATATGCCGAAAACTTCAACAGGTAAGATACAGAAGTTTGTTTTGAGGGAGAAAGCCAAGGCCTTGGGAAGCATTTCTGGACCCCTAGATTGTAAAACAAATAATTTTAGGTGCTCAATAATAAATTAG 1710 0.4041 MASIFPFSNALGNAPFHHTFHKYQAHVILSKHTAACRQQRMKTKRITFINSDQKEEPHLHKQSQNGRTGPQDIKVATLAPNVPAMYELQFAVPMAGAILCTLNSRLDANMVSVLLEHSQAKILFVDYQLLEIAREALDLLAKRAKKKPILVMIMDSDCTSTIDTTSISYEYEKLVAIGQNDFEIVRPHSELDPISINYTSGTTSRPKGVVFSHRSAYLNSLATVLLLQMSLFPVYLWNVPLFHANGWCLAWGVAAQFGTNVCLRKVSPKNIFDNIIKHKVTYMGGAPTVLNMIANSTLADRKQLNHKVAVLTGGSPPPPQILSMMEENGFNITHMYGLTETCGAGTFCAWRPEWDMLPPEEKSKMKARQGVPHVGMEEIDVKDPSTMESVPADGKTVGEVMFRGNTMMSGYFNDLKATEEAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSIEVETVLYSHPAVLEAAVVARPDDLWGQTPCAYLKLKDGFDADVQEIINFCRDRLPHFMAPKTVIFLDMPKTSTGKIQKFVLREKAKALGSISGPLDCKTNNFRCSIIN* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3253 569 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Mal5g3253 569 CDD ttLC_FACS_AEE21_like 69 544 - -
Mal5g3253 569 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 74 552 - -
Mal5g3253 569 Gene3D - 448 550 IPR045851 -
Mal5g3253 569 Pfam AMP-binding enzyme C-terminal domain 462 536 IPR025110 -
Mal5g3253 569 Gene3D - 17 447 IPR042099 -
Mal5g3253 569 Pfam AMP-binding enzyme 74 453 IPR000873 -
Mal5g3253 569 SUPERFAMILY Acetyl-CoA synthetase-like 74 547 - -
Mal5g3253 569 MobiDBLite consensus disorder prediction 49 71 - -
Mal5g3253 569 PANTHER ACYL-ACTIVATING ENZYME 74 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3253 Mal-Chr5 95561566 95571254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g3253 85 553 Miscellaneous Gene Families AT1G20560 62.208 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3253 - - mtr:MTR_8g074120 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3253 5 95561566 95571254 Mal5g3253 5 95561566 95571254 ECH
Mal6g0927 6 13999804 14005267 Mal5g3253 5 95561566 95571254 PCT