Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0925 ATGGCGACGAGAAAATCCACACACCTCCTCAAACACCTCTGCACCTCACGCCACCACCTCATCCACCCCCGCACCGTAACCTACATGCCCCGCCCCGGCGACGGAAACCTTCGAACCGTAACCCTGATCCCCGGCGACGGAATCGGACCTTTGGTAACCGGCGCGGTGGAGCAAGTAATGGAAGCGATGCACGCGCCGGTGCACTTTGATAAATTCGAAGTGCACGGTGACATGAAAGCATTTCCCAACGAAGTGATGGAATCGATTAAGAGGAATAAGGTTTGTTTGAAAGGTGGATTGGCGACTCCGATGGGTGGTGGTGTTAGTTCGCTTAATGTGCAGTTGAGGAAGGAGCTTGATCTCTATGCTTCGCTTGTGAATTGCTTTAATCTACCCGGATTGACTACTAGGCATGATAATGTTGATATTGTTGTTATTAGGGAGAATACTGAGGGGGAATATGCTGGTCTTGAACATGAGGTTGTTCCCGGTGTCGTTGAGAGTCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGCATTGCTAAATATGCTTTCGAGTATGCTTATCTAAATAACAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAGCTTGCAGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCCACAAAGTATCCTGGAATTAAATACAATGAAATTATTGTAGATAACTGTTGCATGCAGCTTGTTTCAAAACCTGAGCAGTTTGATGTCATGGTAACCCCCAATCTTTATGGAAATCTCGTTGCAAATACAGCTGCAGGCATTGCTGGAGGCACTGGTGTCATGCCAGGAGGTAATGTTGGGGCTGAGCACGCTGTATTTGAACAAGGTGCTTCAGCAGGAAATGTTGGTAAGGAAAAAGTAGTACAAGAAAAGAAAGCCAACCCTGTAGCACTCCTTCTTTCGTCGGCAATGATGCTCAGACATCTTCAGTTTCCTGTATTTGCTGAACGATTGGAAAGTGCTGTGAAACAAGTCATTTTAGAGGGTAAATACCGGACAAAGGACCTTGGAGGGACAAGCACCACCCAAGAGGTTGTTGATGCAGTGATAGATGCATTACAATAA 1104 0.4592 MATRKSTHLLKHLCTSRHHLIHPRTVTYMPRPGDGNLRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVHFDKFEVHGDMKAFPNEVMESIKRNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLTTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGKEKVVQEKKANPVALLLSSAMMLRHLQFPVFAERLESAVKQVILEGKYRTKDLGGTSTTQEVVDAVIDALQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0925 367 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 22 365 - -
Mal6g0925 367 SMART Iso_dh_2 39 362 IPR024084 -
Mal6g0925 367 PANTHER ISOCITRATE DEHYDROGENASE [NAD] REGULATORY SUBUNIT 3, MITOCHONDRIAL 22 365 - -
Mal6g0925 367 Pfam Isocitrate/isopropylmalate dehydrogenase 39 362 IPR024084 -
Mal6g0925 367 Gene3D Isopropylmalate Dehydrogenase 29 366 - -
Mal6g0925 367 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 37 366 - -
Mal6g0925 367 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 37 365 IPR004434 GO:0006099
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0925 Mal-Chr6 13982428 13988181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0925 K00030 - gmx:100778831 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0925 6 13982428 13988181 Mal5g3251 5 95526072 95530748 PCT