Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3251 ATGGCAAGAAGATCCATACCCCTCCTCAAACATCTCTTATCAACCCGATCCGAATCCGAACCCTTCACCACCACCTTCAAGCGATGCGTAACCTACATGCACCGTCCCGGCGACGGAACACCCCGTCCCGTAACATTGATCCCCGGCGACGGGATCGGCCCTCTCGTAACCGGCGCCGTTGAGCAAGTGATGGAAGCGATGCACGCGCCGGTTTACTTCGAGAAATTCGACGTACACGGTGATATGAAAGCTGTTCCTAGCGAAGTTCTTGATTCGATTAAGAAGAATAAGGTTTGTCTTAAAGGTGGATTGGTTACTCCTATGGGTGGTGGTGTTAGTTCGCTTAATGTTCAGTTGAGGAAAGAGCTTGATCTTTATGCTTCGCTTGTTAATTGTTTTAATCTTCCTGGTTTGCCTACACGCCATGATAACGTTGATATTGTAGTTATTAGGGAGAATACTGAAGGGGAGTATGCTGGTCTTGAACATGAGGTTGTTCCCGGTGTTGTCGAGAGTCTTAAGTTCTGTTCTGAGCGAATTGCTAAATATGCGTTCGAGTATGCTTACCTGAACAACAGAAAGCAAGTGACTGCTGTCCACAAAGCAAATATAATGAAGCTTGCAGATGGTTTGTTCTTGGAATCTTGTCGAGAGGTTGCCACCAAGTATCCTGGAATTAAATACAACGAAATTATTGTGGACAATTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTTACCCCAAATCTGTATGGAAATCTAGTTGCAAATACTGCAGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTTGGTGCTGAGCATGCCGTGTTTGAGCAGGGTGCTTCAGCAGGAAATGTTGGTAATGAGAAAGTAGCGGCACAAAAGACAGCCAACCCAGTGGCGCTTCTTCTCTCATCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAAATGCTGTTGAAAAAGTCATTCTAGAGGGCAAGTATCGGACAAAGGATCTTGGAGGGACAAGCACCACCCAAGAAGTTGTCGATGCAGTAATAGATGCTTTAGATTGA 1104 0.4629 MARRSIPLLKHLLSTRSESEPFTTTFKRCVTYMHRPGDGTPRPVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKFDVHGDMKAVPSEVLDSIKKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKFCSERIAKYAFEYAYLNNRKQVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEKVAAQKTANPVALLLSSAMMLRHLQFPAFADRLENAVEKVILEGKYRTKDLGGTSTTQEVVDAVIDALD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3251 367 Gene3D Isopropylmalate Dehydrogenase 28 366 - -
Mal5g3251 367 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 41 366 - -
Mal5g3251 367 SMART Iso_dh_2 43 362 IPR024084 -
Mal5g3251 367 Pfam Isocitrate/isopropylmalate dehydrogenase 44 362 IPR024084 -
Mal5g3251 367 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 1 364 - -
Mal5g3251 367 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 1 364 - -
Mal5g3251 367 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 40 365 IPR004434 GO:0006099
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3251 Mal-Chr5 95526072 95530748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3251 K00030 - gmx:100777867 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3251 5 95526072 95530748 Mal5g3251 5 95526072 95530748 ECH
Mal6g0925 6 13982428 13988181 Mal5g3251 5 95526072 95530748 PCT