Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0897 ATGTTTGTCAAGAAGCTCGTGGATAAAGCTTCTTCTATAAAGAAGACAGGTGGAAATTCATCAAATGGATTAAAAGCTAGTGATTTAGATCCATCCTTGGTATTTCATCATGGGGTACCATCAGGTGCTACCAAGTTTACCTGTGACAATATTCACAACATATTGGCTCTTTCTACCAATGATGGGAGGATTAAATTATTTGGTAAAGATAATGCTCAAGTCCTACTTGAATCTAATAAGCCAGTGCCTAGCAAGTTCTTACAGTTCATCCAGAATCAAGGCATACTTATAAATATCACTTCAAAAAACAATATTGAGGTGTGGGACATAGACAAGAAAATGTTGTCTGACTTGTATATTGTTAAAGAAGAAATCACTTCTTTTGCAGTCATTCAACACAGCCTCTATATGTATATTGGAGTTTCTAGTGGTAATATTTCAGTTTTGAAGCTTGATCAAAATTTGCATGTGGTAAAGATGAATTACACCATACCCCTCTCAGCTTCTTTTGGAAATTCAACTGAAGTGACTGATGATACTGTTGTGACACACATATTGCCTCAACCAGCAGCTGAAAGTAAAAGAGTTCTCATAATATTCAGAAATGGCCAAATAATATTATGGGATATTAGAGAAAGCAGATCCATTTTCAGAACTGGTGGAAACGTGTCGCAGCCGCTGCATAATGAAACAAAGAAAGTGTCTTGTGCATGTTGGGTGTGTCCCTTTGGAAGCAAAGTGGTTGTAGGGTACACCAATGGAGAGCTCTTCATTTGGAGCATCCCTTCTATAACCACAGGAAATAACTCAGCTTCTTATTATAGCAGCAAAAACATTCCTATGTTCAAATTTAACTTGGGATATAAATCAGACAAAACTTGTATAGGAACAGTAAAATGGATATATGCTGAAGGAAAGGCTAGTAGACTATATGTCATGGGAGCTTCTAACTCAATGCAGGTAGTGTTGTTGAATGATCATACCGAAACTCGCACAATTAAGTTGGGACTATATTTGTCTGAATGCTGTGTTGACATGGAGATCATATCAACATCGAATGAGCAAAGCAAGCATAAACAAAATTCTTTGATTTTGCTTGGGAAATCTGGCCATGTATATCTGTATGATGATAGTTTGATTGAAAGGTATCTATTGCAATTCCAATCTAAGTCCACTCCCTCAATGCCAAAGGAAGTTATGGTGAGGTTACCACTTGTTGATTCAAGCATCACCATAGCAAAATTCATCTCCAACACTACCAATGTGTTTTATTCTGCAGATGAGTATTACGGTCAGATGATCAAAAATTATCCACAGCTTATTTCAATAGAAACGAATCACAAAGATGGGATTAACCTGAGTTCTGCCAACTTCACTGGATTTTCAAACATTAAAAACTTGTACATAACTGGACATCATAATGGAGCCATAACTTTTTGGGATGCATCATGTCCCTTCTTCATCCCAGTTTTGCAGTTAAAGCAGCAGAGTGAAAATGATCATTCTCTAAGTGGTGTACCTTTGACAGAAATATATTTTGATATCAACTCTCTTCTCCTTGTTTCTGGTGATCAAAGTGGAATGGTTCGTATATTCAAATTCAAACCTGAACCATACGCCGCCAACAGCTTCATGTCTCTTACAGGAGGTGCAAAGAAAGGGGTTGATCATGTAATCCAGAGTGTGAAACTTGTAAAAACTACTGGTGCTGTAATTTGTATGAATATAGATCGTAGCTCAAGGCATCTTGCTGTTGGTTCTGATCAAGGAAATGTTTCAGTTATTAACATAGATGGCCCATCTCTGTTGTATCAGAAACATATTGCAAGTGAAATTTCTATTGGTATCATCTCTCTGCAGTTCATAACCTGCAGTGTATACGGTTTCACAAAAAACATCTTAGCAGTCGGAACAAAGGACTCGTCTGTTCTGGCATTGGATAGTGAAACTGGAAACACACTGAGCACCGGAACTGGAGCTGTTCGTCCTAAGAATCCATCTAAAGCTCTATTTATGCAGATTTTGGATGGACAGTGTGAACCAATTACAAGATCAGTTAGAAAAGATAGCTTAAATTTGAGAGAAGGGAATCATGTTGAGAATGCAACAACAAAGAATTTGTACATTTTGTTGTGTTCTGAAAAGGCTTTATATATCTATTCATTTGATTATGCTATACTGGGAATCAAAAAGGTGCTTTACAAAAAGAAGTTTTACCCTTCTTCCTGTTGCTGGGCATCGACATTTTACCGCGCCTCTGATATTGGTCTCATACTACTTTTCACCACTGGAAAAGTAGAATTAAGGTCTTTGCCAGAATTATCTTTGATAGTGAAGACTTCAATTAGAGGTTTCACTTATACGCCTCCGAAATTCAAGTCATTTTCTGACAGCCACATATGTTGTTCATCGAAAGGAGACCTTGTTTTGGTGAATGGTGACCAGGAAATTTTCGTTTTCTCAGTGTTGGCCCAGAGGAATATTTTGAGGCTCTTGGACTCTGTTGGCTGCATCTACAGGAAGGAAAGGATGCTATCACAAGAAGAGCTTGTTCCTAACCCAGTCATATATAAGGAAAAGAAGAGCATATTCAACTCTGTTATCAAAGATTTTACTGGCACTAAAGAAAAGCATATGCCCCGCATCGAAAAAGAAGATCCTAAAGAAAGTGTCCAGGAACTTTCTGCAATATTTTCACATGCAAATTTTCCACTGGATTCCAACAATACTGTGGATGAAAATGAGCTAGAATTAAACTTAGATGACATTGATCTGGAGAACCAAAGAGAAATACGCAAAGAACAAAGCATATTAGGAGCTCTTAATAAGAAGAAATTGGCAGGCAAATTTCAGGCTCTAAAAGGAAAAGTGAGAGAGATGAAGGGCAACAACCAAAAAGCATCAGATAAGGAAGAGCTACAAGATGAGAAAGCTGGTGCAGTCAATCAAATTAGGAAGAAATATGGATTCTCTTCTTCGTCGAATGAAACAACAAGGGTTGCTAAATTGGCAGAAAGTAAGCTGCGGGAAAACACAAGGAAATTGCAGGCACCTTATATGTCGACCAAGTCACAAAAATGTTGCGGTATGTCATTAGCACGTGAAAATGTATGCAAGAATAAGAATGATGAAAATTCTAATATATATTTGTTTACATATTTTCTTATAACTTGGCAGGGTGTTGAGCTACATACTGCAGAGATGGAAAATACAGCAAAATCATTTTTATCAATGGCAAAACAAGTGCTGCAAAATGCTGAACAGGACAAACGAAGTTGA 3279 0.3736 MFVKKLVDKASSIKKTGGNSSNGLKASDLDPSLVFHHGVPSGATKFTCDNIHNILALSTNDGRIKLFGKDNAQVLLESNKPVPSKFLQFIQNQGILINITSKNNIEVWDIDKKMLSDLYIVKEEITSFAVIQHSLYMYIGVSSGNISVLKLDQNLHVVKMNYTIPLSASFGNSTEVTDDTVVTHILPQPAAESKRVLIIFRNGQIILWDIRESRSIFRTGGNVSQPLHNETKKVSCACWVCPFGSKVVVGYTNGELFIWSIPSITTGNNSASYYSSKNIPMFKFNLGYKSDKTCIGTVKWIYAEGKASRLYVMGASNSMQVVLLNDHTETRTIKLGLYLSECCVDMEIISTSNEQSKHKQNSLILLGKSGHVYLYDDSLIERYLLQFQSKSTPSMPKEVMVRLPLVDSSITIAKFISNTTNVFYSADEYYGQMIKNYPQLISIETNHKDGINLSSANFTGFSNIKNLYITGHHNGAITFWDASCPFFIPVLQLKQQSENDHSLSGVPLTEIYFDINSLLLVSGDQSGMVRIFKFKPEPYAANSFMSLTGGAKKGVDHVIQSVKLVKTTGAVICMNIDRSSRHLAVGSDQGNVSVINIDGPSLLYQKHIASEISIGIISLQFITCSVYGFTKNILAVGTKDSSVLALDSETGNTLSTGTGAVRPKNPSKALFMQILDGQCEPITRSVRKDSLNLREGNHVENATTKNLYILLCSEKALYIYSFDYAILGIKKVLYKKKFYPSSCCWASTFYRASDIGLILLFTTGKVELRSLPELSLIVKTSIRGFTYTPPKFKSFSDSHICCSSKGDLVLVNGDQEIFVFSVLAQRNILRLLDSVGCIYRKERMLSQEELVPNPVIYKEKKSIFNSVIKDFTGTKEKHMPRIEKEDPKESVQELSAIFSHANFPLDSNNTVDENELELNLDDIDLENQREIRKEQSILGALNKKKLAGKFQALKGKVREMKGNNQKASDKEELQDEKAGAVNQIRKKYGFSSSSNETTRVAKLAESKLRENTRKLQAPYMSTKSQKCCGMSLARENVCKNKNDENSNIYLFTYFLITWQGVELHTAEMENTAKSFLSMAKQVLQNAEQDKRS* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0897 1092 Coils Coil 1076 1092 - -
Mal6g0897 1092 Gene3D - 43 395 IPR015943 GO:0005515
Mal6g0897 1092 SMART WD40_4 496 533 IPR001680 GO:0005515
Mal6g0897 1092 SMART WD40_4 220 260 IPR001680 GO:0005515
Mal6g0897 1092 SMART WD40_4 436 481 IPR001680 GO:0005515
Mal6g0897 1092 SMART WD40_4 558 596 IPR001680 GO:0005515
Mal6g0897 1092 SUPERFAMILY Nucleoporin domain 181 327 - -
Mal6g0897 1092 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1058 1091 - -
Mal6g0897 1092 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1023 - -
Mal6g0897 1092 Pfam Lethal giant larvae(Lgl) like, C-terminal 732 828 IPR013905 -
Mal6g0897 1092 SUPERFAMILY WD40 repeat-like 567 825 IPR036322 GO:0005515
Mal6g0897 1092 Gene3D - 416 672 IPR015943 GO:0005515
Mal6g0897 1092 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1023 - -
Mal6g0897 1092 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1058 1091 - -
Mal6g0897 1092 SUPERFAMILY Tricorn protease domain 2 58 652 - -
Mal6g0897 1092 Coils Coil 950 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0897 Mal-Chr6 13451934 13461542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0897 - - cam:101494027 1680.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0897 6 13451934 13461542 Mal6g0897 6 13451934 13461542 ECH
Mal6g0897 6 13451934 13461542 Mal5g3237 5 95021167 95031296 PCT