Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g3237 ATGTTTGTCAAGAAACTCGTTGAGAAAGCTTCCATTAAGAAGCCTAGTGGAAATTCACTAGAAGGGTTAAAAGCTATTGATGTAGATCCACGAGTGGTATTTCATCAAGGGATACCATCAGGTAGTACCAAGTTGGCCTATGACACCATTCAGAAGATACTTGCTCTTTCTACAAAGGATGGCCGGATTAAACTATATGGAAAAGATAATGCTCAAGCGCTGCTTGATTCTAGTGAGCCTCTGCCTAGCAAGTTTTTACAGTTCATCCAGAACCAAGGCATTCTTTTAAATGTCACTTCCAATAATCATATTGAGGTTTGGGACATAGAGAAGAAAATATTGTCTGATGTATATGTTGCTAAAGAAGAAATCACCTGTTTTGCAGTCATTCAACATAGCCTCTATATGTATATTGGACATTCTAATGGTAATATATCAGTTTTGAAGCTTGACCAGAATCCATGGCATATAGTTCAGATGAAATACACCATACCCTTCTCTGCTTCCTATGGGAATTCTGAAGTGTCGGATGATACTATTGTGATGCATATATTGCCTCAACCAGCAGCTGAAAGTAAGAGGGTTCTCGTAATCTTTCGAAATGGCCTAATAATATTATGGGATATTCAAGAAAGCAGAACTATTTTCAGAACCGGTGGAAATATGTCGCAATCACTGCATAATGAAACAAAGAAAGTGACTTCTGCATGTTGGGCATGCCCTTTTGGAAGTAAAGTAGTTGTTGGATACAACAATGGAGAGATCTTCATTTGGAGTATCCCTTCTTCAAATATAGGAAATGGTTCTTCTGCATCTGATTATTATAGTAGTCAAAGCACTCCTTTGCTCAAACTTAACTTAGGATACAAGTCAGAGAAAATTTCTATAGGATCAATAAAATGGATTTATGCCGGAGGAAAGGCTAGTCGATTATATGTCATGGGAGCTTCTGATTATGCAAGTTCAAACTTGTTACAGGTAGTGTTGTTGAATGACCAAACGGAATCTCGCACGATTAAGTTGGGACTTCTTTTGTCTGAAAGCTGTGTTGACATGGAGATCATACCAGCTTCAACTGAGCAAGGCAAGCATAAACAAGATTGTTTCCTTTTGCTTGGGAAGTCAGGCCATGTGTATCTATATGATGATACTTTTATCGAAAGGTATCTGCTACAATGCCAATCGAAGTCCACACCTTCACTTCCAAAGGACGTGATTGCGAAGTTACCACTGGCAGATTCAAGCATCACAACAGCAAAATTCATCACCAACAGCACCAATATGTTTTATTCTGAAGATGAGTACTACAGGCAGCTGGTGAAAAATCATCCACTTTTTGTTCCTGTTGAAACAAATCAAAAGGATGGAATTAGCCCAAGTTCTGTCAAATTTTCTGGATTTTCAAAGGTTCAAAACCTGTATATAACTGGACACAGTAATGGAGCTGTAAACTTCTGGGATGCTTCATGTCCTCTTTTCACCCCTATTTTGCAGTTAAAACAACAGAGTGAAAATGACTTTTCATTAAGTGGTATACCCGTGACAACACTGTACTTCGATATCAACTCTCCTCTTCTTGTTTCCGGTGACCAGAGTGGAACGGTTCGCATCTTTAGATTCAAACCTGAACCATATGCCACCAACATCTTTAGTGGTACCAAAAAAGGGACTGATCACATTATCCAAAGTGTGAAAATTGTTAAGATTACTGGTGCCATAATTTCTGTGAACATAGATCCTAGCTCAAAGCATCTTGCAATTGGTTCTGATCAAGGACATATTTCAGTTTTTAACATGGATGGCCAAACTTTGTTATATCAGAAACATATTTCAAGTGAATTTTCTGCTGGTATCATCTCTCTGCAGTTCCTAACATGCAGTTTGAATGGTTTCGATAAAAACATTTTAGCAGTTGGAACACAAGATTCTTCTGTTCTGGCACTTGATAATGAAACTGGTAACATCATGAGCACAGGAACTGTTCATCCTAAGAAGCCCTCTAAAGCTCTACTTATGCAAGTGTTTGATGGACAAAGTGGACAATTAACTGGATCGATTACAAAAGACGGATTAGACTTGAGTGACACGAATCATATTGAGAATGCAACAACAAAGCAATTGCACATTCTGCTTTGTTCAGAGAAAGCTTTATATGTCTATTCATTAGCGCATGCTGTTCAGGGAGTTAAAAAGGTGCTTAACAAGAAGAAGTTTCATTCCTCTTCTTGTTGCTGGGCATCAACATTTTACGGTCCCTCCGGTGTTGGCCTTGTACTCCTTTTCGCCAATGGAAGAGTAGAATTAAGGTCTTTGCCAGAGTTATCCTTGATTGTGGAGACTTCAATTAGAGGTTTCAGTTATTCACCTCCAAAATCAAAGTCATTTTCTGATTGGCAAATATGTTGTTCGTCCAAAGGAGATCTTGTTTTGGTGAATGGAGACCAAGAAATTGTTGCTGTCTCATTGTTGGTCCAGAGGAATATTTTCAGGATTTTGGATTCTGTTAGCTGCATCTACAGCAAAGAAATGATGCTGTCACAAGAAGAGCTTGCCCCTGGCCCAGTCATTCAGAAGGAAAAGAAAAAGGGTTTATTCAGTTCTTTCTCTAGCAGTAAAGAAAAGCATGTCCCCCCCATGGAAACAGAAGATTCTAGAGAAAGTATCCAGAAACTCTCGGTGATCTTTTCAGAAGAAAATTTTCCTTCTGATGATTATAATAATGATAACCTGACTGCTGATGAAGACGAGGTCGAATTAAACATAGATGACATTGACCTAGATGATCATGTAGAAAAACGCAAAGATCACGGTATATTGGGAATTGGAGCTCTTAATAAGAAGAAATTGACTGGAAAATTTCAAGCTCTAAAAGGAAGATTGAAAGAGATGAAGGGCAACATCCAGAAAACATCAGCTAAGGAAGAGCACCAACAAGAAGAGCAACCTGCTACAGTCGATCAAATCAAGAAGAGATACGGATTTTCTTCTTCCTCCAATGAAACAGCAGGTGTTGCTAAATTAGCAGAAAGCAAGCTCCAGGAGAACTTGAAAAAATTGCAGGGTATCAACCTTCGAACTACAGAAATGCAAGATACAGCAAAATCATTTTCATCAATGGCAAACCAAGTACTGCGAACTGCTGAACAGCAACAAGACAAAAGAAGTTGA 3168 0.386 MFVKKLVEKASIKKPSGNSLEGLKAIDVDPRVVFHQGIPSGSTKLAYDTIQKILALSTKDGRIKLYGKDNAQALLDSSEPLPSKFLQFIQNQGILLNVTSNNHIEVWDIEKKILSDVYVAKEEITCFAVIQHSLYMYIGHSNGNISVLKLDQNPWHIVQMKYTIPFSASYGNSEVSDDTIVMHILPQPAAESKRVLVIFRNGLIILWDIQESRTIFRTGGNMSQSLHNETKKVTSACWACPFGSKVVVGYNNGEIFIWSIPSSNIGNGSSASDYYSSQSTPLLKLNLGYKSEKISIGSIKWIYAGGKASRLYVMGASDYASSNLLQVVLLNDQTESRTIKLGLLLSESCVDMEIIPASTEQGKHKQDCFLLLGKSGHVYLYDDTFIERYLLQCQSKSTPSLPKDVIAKLPLADSSITTAKFITNSTNMFYSEDEYYRQLVKNHPLFVPVETNQKDGISPSSVKFSGFSKVQNLYITGHSNGAVNFWDASCPLFTPILQLKQQSENDFSLSGIPVTTLYFDINSPLLVSGDQSGTVRIFRFKPEPYATNIFSGTKKGTDHIIQSVKIVKITGAIISVNIDPSSKHLAIGSDQGHISVFNMDGQTLLYQKHISSEFSAGIISLQFLTCSLNGFDKNILAVGTQDSSVLALDNETGNIMSTGTVHPKKPSKALLMQVFDGQSGQLTGSITKDGLDLSDTNHIENATTKQLHILLCSEKALYVYSLAHAVQGVKKVLNKKKFHSSSCCWASTFYGPSGVGLVLLFANGRVELRSLPELSLIVETSIRGFSYSPPKSKSFSDWQICCSSKGDLVLVNGDQEIVAVSLLVQRNIFRILDSVSCIYSKEMMLSQEELAPGPVIQKEKKKGLFSSFSSSKEKHVPPMETEDSRESIQKLSVIFSEENFPSDDYNNDNLTADEDEVELNIDDIDLDDHVEKRKDHGILGIGALNKKKLTGKFQALKGRLKEMKGNIQKTSAKEEHQQEEQPATVDQIKKRYGFSSSSNETAGVAKLAESKLQENLKKLQGINLRTTEMQDTAKSFSSMANQVLRTAEQQQDKRS* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g3237 1055 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1051 - -
Mal5g3237 1055 SMART WD40_4 110 149 IPR001680 GO:0005515
Mal5g3237 1055 SMART WD40_4 500 539 IPR001680 GO:0005515
Mal5g3237 1055 SMART WD40_4 402 487 IPR001680 GO:0005515
Mal5g3237 1055 SMART WD40_4 219 259 IPR001680 GO:0005515
Mal5g3237 1055 SMART WD40_4 560 598 IPR001680 GO:0005515
Mal5g3237 1055 SMART WD40_4 27 67 IPR001680 GO:0005515
Mal5g3237 1055 Coils Coil 946 980 - -
Mal5g3237 1055 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1051 - -
Mal5g3237 1055 Pfam Lethal giant larvae(Lgl) like, C-terminal 709 828 IPR013905 -
Mal5g3237 1055 SUPERFAMILY WD40 repeat-like 51 606 IPR036322 GO:0005515
Mal5g3237 1055 Gene3D - 186 507 IPR015943 GO:0005515
Mal5g3237 1055 Gene3D - 508 836 IPR015943 GO:0005515
Mal5g3237 1055 SUPERFAMILY WD40 repeat-like 513 811 IPR036322 GO:0005515
Mal5g3237 1055 Gene3D - 28 174 IPR015943 GO:0005515
Mal5g3237 1055 Coils Coil 1040 1055 - -
Mal5g3237 1055 CDD R-SNARE_STXBP5_6 987 1045 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g3237 Mal-Chr5 95021167 95031296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g3237 - - gmx:100811900 1623.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3237 5 95021167 95031296 Mal5g3237 5 95021167 95031296 ECH
Mal6g0897 6 13451934 13461542 Mal5g3237 5 95021167 95031296 PCT