Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0517 ATGAAGTTTTTGTGGCGGTTGTCAGTGTTTTTGTTTGTAGGGTTTATGTTGACTTGTATGTCAACAGCGAGATTCGTGGTGGAGAAGAACAGCTTGTCGGTGACTTCGCCGGATAAAATCAAAGGCAAACATGATAGTGCGATCGGCAACTTCGGGATTCCTCAATACGGTGGTAGCATGGCCGGTAACGTTGTTTACCCTAAAGATAACAATAAGGGTTGCAAAGACTTCGATTCCTCTTTCAAATCCAAACCCGGTGCTCTTCCCACCATCCTTTTGCTCGATCGTGGAAATTGCTTCTTTGCTTTGAAGGTTTGGAATGCCCAAAAGGCTGGAGCTTCTGCTGTTCTCGTTGCAGATGATATAGAGGAACCGTTGATTACTATGGACACACCGGAAGAGGATGGATCGTCTGCTAAATACATTGAGAACATAACAATACCATCTGCTCTTATTGGCAAAAGTTTTGGTGAGAAGTTGAAGGATGCAATCAGTGGTGGGGATATGGTCAATGTTAATCTTGACTGGAGAGAGGCTGTTCCTCATCCAGATGATCGTGTCGAGTATGAGTTGTGGACCAATAGTAATGATGAGTGCGGAGTTAAATGTGATATGTTGATTGAGTTTTTGAAGGATTTCAAGGGTGCGGCACAGATTTTAGAGAAAGGGGGTTATACTCAGTTTACACCTCATTATATAACTTGGTACTGCCCTCATGCATTTACATTGAGTAAACAGTGCAAGTCCCAATGCATAAATCATGGAAGATACTGCGCTCCAGATCCTGAGCAGGACTTCAGCACTGGTTACGATGGGAAAGATGTGGTTGTTGAGAATTTAAGGCAGCTATGTGTTTTCAAGGTCGCAAAAGAAACTGAAAAGCCTTGGGTGTGGTGGGACTATGTCACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAGTACAACAAGGAATGTGCAAATGGCGTCATTAAATCTCTGGGTCTTGACATCGGAAAGATTGACAAGTGCATGGGAGATCCTGATGCCGATACTGAAAATTCCATTTTGAAAGAAGAGCAAGATGCCCAAATTGGGAAGGGATCACGTGGTGATGTTACCATATTGCCTACTCTTGTTGTCAACAACAGACAATATCGAGGTAAACTGGAGAAAGGTGCCGTTCTAAAGGCTATTTGTTCTGGGTTTGAGGAAACTACTGACCCGGCTGTTTGTTTGAGCAATGATGTGGAAACAAATGAGTGCTTGACAAACAACGGTGGTTGTTGGCAGGATAAAGCGGCGAATATCACTGCATGCAAGGATACATTCCGTGGCCGAGTATGTGAATGCCCCTTGGTTGATGGTGTGCAATTCAAAGGAGACGGTTATACAACTTGTGAAGTCGGTGGACCTGGGCGTTGCAAGATTAACAATGGAGGCTGTTGGCATGATGCCCGGAACGGACATGCATTTTCTGCTTGTTTGGATGATGGAGGAGTTAAGTGCCAGTGTCCTACAGGGTTTAAAGGTGATGGTGTAAAAAATTGTGAAGACATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAAAATACTTGGGGCAGCTATGACTGCAGTTGTAGTGGAGATCTTCTGTATATCAAGGACCATGATACCTGTATAAGTAAAACTGCCAGTCAGGCAAAATCAACTTGGGCTGCTTTTTGGGTCATTTTGATTGGCTTGGCTATGATTGCTGGAGGGGGATTCCTTGTGTACAAATATAGAATTAGGCAATACATGGATTCTGAAATTAGAGCAATCATGGCGCAATATATGCCCTTGGACAGCCAAGCAGAAGTTCCAAATCACGTCAATCATCAAAGAGCTTGA 1875 0.4341 MKFLWRLSVFLFVGFMLTCMSTARFVVEKNSLSVTSPDKIKGKHDSAIGNFGIPQYGGSMAGNVVYPKDNNKGCKDFDSSFKSKPGALPTILLLDRGNCFFALKVWNAQKAGASAVLVADDIEEPLITMDTPEEDGSSAKYIENITIPSALIGKSFGEKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLIEFLKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVVENLRQLCVFKVAKETEKPWVWWDYVTDFQIRCPMKEKKYNKECANGVIKSLGLDIGKIDKCMGDPDADTENSILKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEVGGPGRCKINNGGCWHDARNGHAFSACLDDGGVKCQCPTGFKGDGVKNCEDIDECKEKKACQCPECSCKNTWGSYDCSCSGDLLYIKDHDTCISKTASQAKSTWAAFWVILIGLAMIAGGGFLVYKYRIRQYMDSEIRAIMAQYMPLDSQAEVPNHVNHQRA* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0517 624 ProSitePatterns EGF-like domain signature 2. 497 511 IPR000742 -
Mal6g0517 624 Gene3D Laminin 467 517 - -
Mal6g0517 624 CDD EGF_CA 513 541 - -
Mal6g0517 624 Gene3D - 22 183 - -
Mal6g0517 624 SUPERFAMILY PA domain 75 170 IPR046450 -
Mal6g0517 624 Gene3D Laminin 518 555 - -
Mal6g0517 624 Pfam PA domain 61 160 IPR003137 -
Mal6g0517 624 ProSitePatterns Calcium-binding EGF-like domain signature. 513 539 IPR018097 GO:0005509
Mal6g0517 624 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 14 603 - -
Mal6g0517 624 SMART egfca_6 513 555 IPR001881 GO:0005509
Mal6g0517 624 Pfam Complement Clr-like EGF-like 496 516 IPR026823 -
Mal6g0517 624 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 14 603 - -
Mal6g0517 624 CDD PA_VSR 50 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0517 Mal-Chr6 6612856 6616525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0517 23 624 Miscellaneous Gene Families AT2G14740 84.298 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0517 - - gmx:100820115 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0517 6 6612856 6616525 Mal1g0581 1 6700247 6706987 PCT