Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0581 ATGAAGCTTCGAAGTTCTTCTTCTATGGGTTTAATTTTAGGGTTTCTGTTACTATCGTTGACGCCATCATCAATGGCGAAATTCGTGGTGGAGAAGAACAGCTTGAGGGTTACTTCGCCGGATACTATCAAGGGAACATACGATAGCGCGATTGGCAACTTTGGGATACCTCAATACGGTGGTAGTATGGCTGGGAATGTTGTGTATCCAAAGGATAATCAAAAGGGTTGTAAGGAATTTGATGAGTCTGGGATTTCGTTTAAATCTAAGCCTGGTGCTCTTCCTACAATTGTTTTGGTCGATCGTGGAAGTTGCTTTTTTGCTTTGAAGGTGTGGAATGCCCAAAAGGCTGGAGCTTCTGCTGTTCTTGTTGCCGATGATATTGAAGAAAAATTAATAACCATGGACACTCCTGAGGAGGATGGATCATCTGCAAAATATATAGAGAACATAACAATACCATCGGCTCTCATTGAAAAGAGTTTCGGTGAAAAATTGAAGAAAGCCATAAGTAGTGGGGATATGGTCAACGTAAATCTTGATTGGAGAGAGGCCGTCCCTCACCCAGATGATCGTGTGGAGTATGAGCTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTTAAGGGTGCGGCACAAATATTAGAGAAAGGCGGTTATACTCAGTTTACACCTCATTATATAACTTGGTACTGTCCTCAGGCATTCACATTAAGTAAGCAGTGCAAGTCTCAGTGCATTAACCATGGAAGATACTGCGCTCCAGATCCTGAGCAGGATTTCAGCTCCGGTTATGATGGGAAAGATGTGGTTATTGAAAACTTGAGGCAGTTGTGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGACTATGTTACTGATTTTCAAATTAGGTGCCCAATGAAGGAGAAAAAGTACAACAAGAAATGTGCAGATGCTGTCATTGAATCACTTGGTCTTGATATGAAAAAGATTGAAAAGTGTATGGGAGATCCAGATGCGGATTCTGAAAATTCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTTGGGAAGGGATCACGAGGTGATGTTACCATCTTGCCTACTCTAGTTGTCAACAGTAGACAGTATCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTTCTGGTTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCGGTGATGTGGAGACAAATGAGTGCTTGGAGAACAATGGTGGTTGTTGGAAAGATAAAGGAGCTAACATAACTGCATGCAAGGATACTTTCCGTGGGCGAGTATGTGAGTGCCCCTTGGTAGACGGTGTGCAGTTCAAAGGAGACGGTTATACGACCTGCGAAGCTAGTGGACCTGGACGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCCCGGAATGGACATGCATTTACTGCTTGTTCGGATAATGGAGGGGTTAAATGCGAGTGTCCTGCAGGGTTTAAAGGTGATGGTGTTAAAAATTGTGCAGACATTGATGAATGCAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGCAGCTATAACTGCAGTTGCAGTGGGGATCTTCTGTATATCAGGGACCATGATGCATGCATAAGTAAAACTGCCAGTCAGGAAGGAAAGTCTGCTTGGGCTGCATTTTGGGTCATTGTAGTCGGCTTAGTTCTGGCCGCTTCAGGGGCATACCTTGTCTACAAATATAGAATTAGGTCATACATGGATTCTGAAATAAGGGCCATCATGGCACAGTATATGCCTTTGGACAGCCAATCAGAAGTTGTAAATCATGTCAACGATGAAAGAGCATGA 1896 0.4304 MKLRSSSSMGLILGFLLLSLTPSSMAKFVVEKNSLRVTSPDTIKGTYDSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFDESGISFKSKPGALPTIVLVDRGSCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGEKLKKAISSGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSSGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDMKKIEKCMGDPDADSENSVLKEEQDAQVGKGSRGDVTILPTLVVNSRQYRGKLEKGAVMKAICSGFEETTEPAVCLSGDVETNECLENNGGCWKDKGANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHEARNGHAFTACSDNGGVKCECPAGFKGDGVKNCADIDECKEKKACQCPECSCKNTWGSYNCSCSGDLLYIRDHDACISKTASQEGKSAWAAFWVIVVGLVLAASGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQSEVVNHVNDERA* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0581 631 Pfam PA domain 64 166 IPR003137 -
Mal1g0581 631 Gene3D - 25 189 - -
Mal1g0581 631 MobiDBLite consensus disorder prediction 348 366 - -
Mal1g0581 631 ProSitePatterns Calcium-binding EGF-like domain signature. 519 545 IPR018097 GO:0005509
Mal1g0581 631 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 15 610 - -
Mal1g0581 631 CDD PA_VSR 53 180 - -
Mal1g0581 631 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 15 610 - -
Mal1g0581 631 Pfam Complement Clr-like EGF-like 502 522 IPR026823 -
Mal1g0581 631 CDD EGF_CA 519 547 - -
Mal1g0581 631 Gene3D Laminin 473 553 - -
Mal1g0581 631 SUPERFAMILY PA domain 59 170 IPR046450 -
Mal1g0581 631 MobiDBLite consensus disorder prediction 348 369 - -
Mal1g0581 631 Gene3D Laminin 412 468 - -
Mal1g0581 631 SMART egfca_6 519 561 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0581 Mal-Chr1 6700247 6706987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0581 26 631 Miscellaneous Gene Families AT2G14740 85.149 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0581 - - gmx:100803958 1223.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0581 1 6700247 6706987 Mal1g0581 1 6700247 6706987 ECH
Mal6g0517 6 6612856 6616525 Mal1g0581 1 6700247 6706987 PCT