Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0178 ATGTGCAAGTTATCATCATCATCAACCTCTGTCTCCACTTTGTGTGAAAACAATAACAACCAAACAAATAATAAATCCACAACCACAATCAAAACACAGAATATCAAACCTGACATGTTAACACCATTGATCCCTAAATCCCCAACATTCAAACAACAAGACCAACAAAAGAAAACCCATTTTTCTCTTGCTTTCAATGAAGCCAAACACATTGCAAACATAGCATTACCTATGGTGTTAACAGGTTTATTACTTTATTCTCGTTCCATCATTTCAATGTTGTTTCTTGGTCGTGTTGGTGAACTTGCTTTAGCAGGTGGGTCACTTGCCATTGGATTTGCAAACATCACAGGTTACTCCATTCTCTCTGGTCTTGCCATGGGAATGGAACCTATTTGTGGTCAAGCTTTTGGTGCTAAAAGATTCAAACTTCTTGGCTTAACAATGCAAAGAACAATGATTCTTCTTCTTTTAACTTCAATTTTCATTTCATTCTTATGGCTTAACATGAAGAGATTATTGCTTTTATGTGGCCAACAAGAAGATATTGCAAACGTTGCACAATCTTACATTCTTTATTCTCTTCCTGATCTTGTAGCACAATCATTGCTACACCCTTTGAGAATCTATCTTCGAAGCCAATCCATAACACTTCCTTTAACATACAGTGCTACTCTGTCTATTCTTCTTCACATTCCTATAAATTATTTTCTAGTGAATGTTCTTCAATTAGGAATCAAAGGAATCGCGTTAGGTTCCGTTTGGACGAATTTCAACCTCGTTGTTTCGTTGATTATTTACATTTGGGTTTCTGGAACACACAAGAAAACATGGGGTGGAATTTCCTCTGCTTGTTTCAAAGGATGGAAATCGCTTTTGAATTTAGCAATTCCAAGCTGCATTTCGGTTTGTCTCGAATGGTGGTGGTACGAAATCATGATTTTGATTTGTGGATTATTGCTTAATCCACATGCAACTGTTGCATCAATGGGGGTTTTGATTCAAACAACTGCATTGATATACATTTTTCCATCTTCATTGAGTTTTGGTGTTTCAACAAGAGTTGGAAATGAACTTGGTGCTGAAAATCCACAAAAAGCAAAACTTGCAGCACTAGTAGGACTCTGTTTCAGTTTTGTTTTGGGTTTCTCTGCTTTGTTTTTCGCAGTTTCGGTTAGAAACATTTGGGCTTCAATGTTCACAAGTGATCCACAAATAATTGCTTTAACTTCAATGGTGTTACCTATTATAGGACTATGTGAGCTTGGAAATTGTCCACAAACAACGGTTTGTGGTGTTTTGAGGGGAACGGCGAGGCCGAAATTAGGCGCAAATATAAACTTAGGTTGTTTTTATCTTGTGGGAATGCCTGTTGCAGTTTGGTTGAGTTTCTTTGCTGGATTTGATTTCAAAGGTTTGTGGTTTGGTCTTTTGGCTGCTCAAGGTTCATGTATGGTTACAATGTTGTTTGTTTTGGTTCGTACAAATTGGGAAAATCAAGTACAAAGAGCTAAGGAGTTAACATCATCAGATTCAAGTGAAGAAGAACAAGAAGAAGAGAAAGTGATTGTGAGTTCATGTGACACAAAAGAGTGCTCTGATTCATTAGTTTGA 1614 0.3699 MCKLSSSSTSVSTLCENNNNQTNNKSTTTIKTQNIKPDMLTPLIPKSPTFKQQDQQKKTHFSLAFNEAKHIANIALPMVLTGLLLYSRSIISMLFLGRVGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLTMQRTMILLLLTSIFISFLWLNMKRLLLLCGQQEDIANVAQSYILYSLPDLVAQSLLHPLRIYLRSQSITLPLTYSATLSILLHIPINYFLVNVLQLGIKGIALGSVWTNFNLVVSLIIYIWVSGTHKKTWGGISSACFKGWKSLLNLAIPSCISVCLEWWWYEIMILICGLLLNPHATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAENPQKAKLAALVGLCFSFVLGFSALFFAVSVRNIWASMFTSDPQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFFAGFDFKGLWFGLLAAQGSCMVTMLFVLVRTNWENQVQRAKELTSSDSSEEEQEEEKVIVSSCDTKECSDSLV* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0178 537 MobiDBLite consensus disorder prediction 1 32 - -
Mal6g0178 537 PANTHER MULTIDRUG RESISTANCE PROTEIN 46 518 - -
Mal6g0178 537 TIGRFAM matE: MATE efflux family protein 77 474 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal6g0178 537 Pfam MatE 77 237 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal6g0178 537 Pfam MatE 298 461 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal6g0178 537 CDD MATE_eukaryotic 67 503 IPR045069 GO:0042910|GO:1990961
Mal6g0178 537 PANTHER PROTEIN DETOXIFICATION 46 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0178 Mal-Chr6 2545571 2547184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0178 K03327 - gmx:100811560 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0178 6 2545571 2547184 Mal6g0178 6 2545571 2547184 ECH
Mal1g1993 1 26160502 26162115 Mal6g0178 6 2545571 2547184 ECH