Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1993 ATGTGTCATTTAACTTGTCAACCTCATTGCAAATGCAATTCAAATCCTGAATATCTAGTAGTTTCAATCAAAGATACAAAAGAATCCAACAACATGATGACCAATCCACTTATCAAAAAAGACACAAACATAGAAAATCCAACAACACAAATCCAAAAAACCCATCTTAGAGCTACCTTCAAAGAAGTTATTTCTATATCCAAAATTGCTTTTCCCATGATTTTCACCGGTCTCTTACTCTATTGTCGTTCAATGATCTCCATGCTCTTTCTTGGTCACCTCGGCGAACTTGCCTTAGCCGGCGGTTCACTTGCGGTTGGCTTCGCTAACATTACCGGTTACTCAATCCTCTCCGGTCTCGCCGTAGGGATGGAACCTATTTGTGGACAAGCCTTTGGTGCCAAAAGATTCACTCTCCTTGGTCTATGCTTACAAAAAACCATTCTCTTATTACTCTTCACTTCAATTCCAATATCAATACTTTGGCTTTACACAAAGCATATCCTTCTTTCATGTGGCCAAGAAGAAGATATAGCTACAGAAGCTCAAATATATCTTCTATACTCCATTCCTGATCTGTTAGCACAATCTTTTTTACACCCTTTAAGAATTTACCTTAGAAGCCAATCCATTACTCTGCCTCTCACACTTTGTGCTACTTTAGCAATTTTTCTTCACATTCCCATAAACTATTTTCTTGTTTCCCACCTCAATATGGGAATCAAAGGTGTAGCTTTAAGTGGGGTGTGGACAAATTTCAACCTTGTTGCATCTTTGATTCTTTACATAGTTTTCTCTGGCACACACAAGAAAACATGGGGTGGTTTTTCATCACAATGTTTCAAACAATGGAAATCACTTCTCAATTTAGCTATACCAAGTTGTCTTTCTGTTTGCCTTGAATGGTGGTGGTATGAAATCATGATTTTGTTATGTGGTTTGTTGATAAATCCAAGAGCAACCGTTGCTTCTATGGGAATTTTGATTCAAACTACTTCTTTGCTTTATATTTTTCCATCATCAATAAGTTTTAGTGTTTCCACTAGAGTTGGTAACAAACTTGGTGCTCAAAAGCCATCAAAAGCAAAACTTTCAGCCATTGTAGGACTCTCTTGTAGCTTCATTTTAGGTGTGTTTGCTTTGGTTTTTGCTATAATGGTTAGAAACATTTGGGCTAGCATGTTCACTGAAGACAAAGAGATAATAAAAATTACATCTTTGGTGTTACCTTTGATAGGACTTTGTGAACTTGGTAATTGTCCACAAACAACAGGCTGTGGGGTGCTAAGAGGAACTGCAAGGCCTAAAGTGGGTGCAAATATCAATTTTGGTTGTTTTTACATTGTTGGAATGCCTGTGGCAATTTGGTTAGCTTTTTTTGTTGGGTTTGATTTTCAAGGATTGTGGCTTGGGTTGCTTGTGGCACAGGGAACTTGTGCTGTGACTATGTTGGTGGTTTTGAGTCAAACGGATTGGGATTTTGAAGCACTAAGAGCTAAGAAACTAACTGGCATAGGAGAAGCAACAACAAGAAGTGATGTTTTTGTTGATGACAGCAAAGAAATTGAGGCAGATAAGTTACTTAAAGCTGAAATTAAGGAAGATTCTTCTTAA 1614 0.3761 MCHLTCQPHCKCNSNPEYLVVSIKDTKESNNMMTNPLIKKDTNIENPTTQIQKTHLRATFKEVISISKIAFPMIFTGLLLYCRSMISMLFLGHLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLCLQKTILLLLFTSIPISILWLYTKHILLSCGQEEDIATEAQIYLLYSIPDLLAQSFLHPLRIYLRSQSITLPLTLCATLAIFLHIPINYFLVSHLNMGIKGVALSGVWTNFNLVASLILYIVFSGTHKKTWGGFSSQCFKQWKSLLNLAIPSCLSVCLEWWWYEIMILLCGLLINPRATVASMGILIQTTSLLYIFPSSISFSVSTRVGNKLGAQKPSKAKLSAIVGLSCSFILGVFALVFAIMVRNIWASMFTEDKEIIKITSLVLPLIGLCELGNCPQTTGCGVLRGTARPKVGANINFGCFYIVGMPVAIWLAFFVGFDFQGLWLGLLVAQGTCAVTMLVVLSQTDWDFEALRAKKLTGIGEATTRSDVFVDDSKEIEADKLLKAEIKEDSS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1993 537 Pfam MatE 72 232 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal1g1993 537 Pfam MatE 293 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal1g1993 537 CDD MATE_eukaryotic 62 496 IPR045069 GO:0042910|GO:1990961
Mal1g1993 537 PANTHER MULTIDRUG RESISTANCE PROTEIN 42 513 - -
Mal1g1993 537 PANTHER PROTEIN DETOXIFICATION 42 513 - -
Mal1g1993 537 TIGRFAM matE: MATE efflux family protein 72 469 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1993 Mal-Chr1 26160502 26162115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1993 K03327 - gmx:100777255 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1993 1 26160502 26162115 Mal6g0178 6 2545571 2547184 ECH
Mal1g1993 1 26160502 26162115 Mal1g1993 1 26160502 26162115 ECH