Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5204 ATGATTACCGGTAAGGATATATACGATGTTTTTGCCGCGATTGTGCCATTATATGTTGCTATGATATTAGCATACGGTTCAGTTCGTTGGTGGAAAATTTTCACACCAGATCAATGTTCTGGAATAAACCGTTTTGTCGCGGTTTTCGCAGTTCCATTACTATCATTCCATTTTATTTCATCCAATGATCCTTATGCGATGAATTACCATTTCTTAGCAGCCGATTCACTTCAAAAAGTAGTTATCCTTGGTGCTCTTTTTATATGGAACACGTTCTCAAAAAACCAAGATAGTCTTGATTGGACAATAACACTTTTCTCCCTTTCAACTCTTCCTAACACACTTGTTATGGGAATCCCTCTTTTAAGAGCTATGTATGGTGATTTTTCAGGAAATCTCATGGTACAAATAGTTGTTCTACAAAGTGTTATTTGGTACACTCTTATGTTGTTTTTGTTTGAATATAGAGCTGCTAAACTTCTCATAACAGAGCAGTTTCCTGAAACTGCAGCTTCTATAACATCATTCAAAGTTGATTCTGATGTTGTTTCCCTCAATGGTAGGGAACCTCTTCAAACTGATGCAGAGATAGGTGAAGATGGTAAACTTCATGTTGTTGTGAAAAGATCAACTACTAACTCTATGGTATCTGGTTCGTTTAACAAATCTCATTTAAATAATATGACGCCACGAGCTTCAAATCTAACCGGTGTTGAGATATATTCGGTTCAATCATCAAGAGAACCAACACCAAGAGGTTCTAGTTTTAACCAAACTGATTTTTATGCCATGTTTCAAAGTAAAGCGCCTAGTCCGAAACACGGTTACACAAATAGCTTTCAAAGTAATGGTGATATTTATTCTATGCAATCTTCCAAAGGGGTTACGCCGAGGACTTCAAATTTCGAAGATGAGACATTGAAGATGCATAAGAAGAGGGGAGGGAGGAGTATGAGTGGTGAGTTGTTTAATAATGGTGGTTCTTACCCTCCTCCAAACCCTATGCTTTCTGGTTCTACAAGTGCTGGCACAAAGAAGAAAGATAGCATTGGTGGTGGAAGTGGTAATGGGCCTAATAACAAGGAGTTACACATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGAAGGGAATCTTAGACATGCAGTTAATAGAGCTGCTTCTACTGATTTTGGAACTGTTGATCCTTCCAAATATGTTCCTCATGAAAATGCTGTTGCATCAAAAGCTGTTAGTGAATTGATTGAGAACATGAGTCCTAGAGAAAGGGATGTTGAAATTGAAGAAGCAGCAAAGTCTCCATATATTAGCCAGAAGAAGATGGACTTGGAAGGAGGAGGGGATGCAAACAAAAACACACAGATGCCACCAGCAAGTGTCATGACAAGACTCATTCTAATCATGGTTTGGAGAAAACTCATCAGAAATCCTAATACCTACTCAAGTCTTATAGGACTTGTTTGGTCTCTTGTATCATTTAGGTGGCACATTGAAATGCCCTCTATTGTAAAAGGTTCCATCTCAATACTGTCTGATGCTGGTCTTGGAATGGCCATGTTCAGTCTAGGTCTGTTCATGGCATTACAGCCTAAGCTGATTGCATGTGGAAAACGAGTTGCAACATTTTCTATGGCTGTTAGGTTCTTGACTGGTCCAGCTGTGATTGCTGCAACCTCAATAGCAATTGGTATCCGTGGAGTTCTGTTACATGTTGCAATTGTTCAGGCTGCACTTCCCCAAGGTATTGTTCCCTTTGTGTTTGCCAAAGAATACAATCTCCATCCAAATATACTCAGTACTGGGGTTATATTTGGAATGTTGATTGCATTGCCTATAACAATACTCTACTATGTGCTTCTTGGAGTATAG 1872 0.3894 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFLAADSLQKVVILGALFIWNTFSKNQDSLDWTITLFSLSTLPNTLVMGIPLLRAMYGDFSGNLMVQIVVLQSVIWYTLMLFLFEYRAAKLLITEQFPETAASITSFKVDSDVVSLNGREPLQTDAEIGEDGKLHVVVKRSTTNSMVSGSFNKSHLNNMTPRASNLTGVEIYSVQSSREPTPRGSSFNQTDFYAMFQSKAPSPKHGYTNSFQSNGDIYSMQSSKGVTPRTSNFEDETLKMHKKRGGRSMSGELFNNGGSYPPPNPMLSGSTSAGTKKKDSIGGGSGNGPNNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTVDPSKYVPHENAVASKAVSELIENMSPRERDVEIEEAAKSPYISQKKMDLEGGGDANKNTQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWHIEMPSIVKGSISILSDAGLGMAMFSLGLFMALQPKLIACGKRVATFSMAVRFLTGPAVIAATSIAIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLHPNILSTGVIFGMLIALPITILYYVLLGV* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5204 623 TIGRFAM 2a69: auxin efflux carrier 1 622 IPR014024 -
Mal5g5204 623 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 623 - -
Mal5g5204 623 MobiDBLite consensus disorder prediction 324 361 - -
Mal5g5204 623 Pfam Membrane transport protein 10 618 IPR004776 GO:0016021|GO:0055085
Mal5g5204 623 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 623 IPR033526 GO:0010315|GO:0010329
Mal5g5204 623 MobiDBLite consensus disorder prediction 324 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5204 Mal-Chr5 125978957 125981638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5204 103 623 Organic Solute Cotransporters AT5G57090 73.492 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5204 K13947 - gmx:100305383 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5204 5 125978957 125981638 Mal5g5204 5 125978957 125981638 ECH
Mal5g5204 5 125978957 125981638 Mal4g3365 4 98517637 98521373 PCT