Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3365 ATGATCAAAGGTAAAGATGTATACAATATTCTTGAGAGTATTATGCCCCTATATGTAGCCATGATATTAGGCTATGCATCAATTAAATGGTGGAAAATCTTCACACCCGATCAATGTGTTGGTATAAACCGTTTTGTAGCAATGTTTGCAGTTCCTACACTTGCTTTTATATACATATACCCAATTAACCCTTATCATATGAATTGGAGGTTAATAATTGCTGACACACTTCAAAAAGTTGTGACATTGATTGCTCTAATTCTATGGAACATTTTCACAAAACGTGGTGGTTTAGATTGGAGTATAACTCTTTTCTCACTTACCAATTTACCAAACACACTTGTTGTTGGGATTCCTCTTTTGAATGCAATGTATGGAGAATTTACCACATCACTTTTGACCCAAATTTTGGTCATACAAAGTGTTTTATGGTATAGTGTTTTGTTGTTGATGTATGAATATAGAGCCGCTAAGCTCTTTATTTCTCAACAATTTGTTGACACTAATGAAGGGTCCCACAAGATTGAAATTGAATCACTTGAATTGGGAGAAATTGGTAATAATCTTGGTGTCAAGTCTCATTCAAACCCTAGAGTGCCAAATCTTACTAGGCTTGAGGTATATTCAAGCTACTCAAATAGTCCCCAAAATAGTGGTTTTGAAGATAAGATGTTAAATATGCATGGGACAAGATTTAAGAAGAGCAGGAGTTGCAATAGTATGAGTGCATTTATGAAGAGCAAGAGTTGCACTAGTATGCGTGCGAAGGTTTCTCCTTACCCAATTCTAAAATCAACTTTTTCAGAAAAAATCATTGATGGCCAAAGAAAGATAGATTTCAGTGATGGCTTAGGCATGCCACAAGAAATTGAAGCATCAAAAGGCGTTCATGAATTGATTGGAAGAAGTACTTCTAGTGGTAAAGTAAGTGGAGACAAAGATCATGAGAGTGAGGAGAGGCAGAAGGAGCTTGTTGATAATGAAGAAGGAAGTGTAAACGATGAACAACAAATGCAACCTGGTCGTGGCACGATGACAAAGCTCATTCTTTTTAGGGTTTGGAAGAAGCTCTCAAGAAATCCTAATCTCTATGCTTCAGTTCTTGGCATTGTATGGGCTCTCATATCATCTAGGTGGAACATCAAAATGCCATCAATCATACATGACTCTATTACAATAATATCTCATACTGGACTAGGAATGTCCATGTTTAGTCTAGGAATATTCATGGCATTACAACCCAAGATCATTGCTTGTGGAAAAACTCAAGCAGCAATTTCAATGGTACTTAAGTTCTTGGTTGGTCCTGCATCATTTGGTGCAACCTCTGCAGCCGTTGGTATTCGTGGAGTTGTTTTTAAAGTTGGAATTATTCAGGCCGCTCTTCCCCAAGGTATTGTTCCATTTGTATTCGCCAAAGAGTACAATCTCCACGCCGAAATATTTAACACAGCGGTTTCTCTTGGATTGGCACTTGCATTCCCTATAGCAATACTATACTACGTGCTGCTTGAGCTTAACAATTCTTTTTAA 1533 0.3725 MIKGKDVYNILESIMPLYVAMILGYASIKWWKIFTPDQCVGINRFVAMFAVPTLAFIYIYPINPYHMNWRLIIADTLQKVVTLIALILWNIFTKRGGLDWSITLFSLTNLPNTLVVGIPLLNAMYGEFTTSLLTQILVIQSVLWYSVLLLMYEYRAAKLFISQQFVDTNEGSHKIEIESLELGEIGNNLGVKSHSNPRVPNLTRLEVYSSYSNSPQNSGFEDKMLNMHGTRFKKSRSCNSMSAFMKSKSCTSMRAKVSPYPILKSTFSEKIIDGQRKIDFSDGLGMPQEIEASKGVHELIGRSTSSGKVSGDKDHESEERQKELVDNEEGSVNDEQQMQPGRGTMTKLILFRVWKKLSRNPNLYASVLGIVWALISSRWNIKMPSIIHDSITIISHTGLGMSMFSLGIFMALQPKIIACGKTQAAISMVLKFLVGPASFGATSAAVGIRGVVFKVGIIQAALPQGIVPFVFAKEYNLHAEIFNTAVSLGLALAFPIAILYYVLLELNNSF* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3365 510 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 179 IPR033526 GO:0010315|GO:0010329
Mal4g3365 510 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 312 506 IPR033526 GO:0010315|GO:0010329
Mal4g3365 510 MobiDBLite consensus disorder prediction 295 339 - -
Mal4g3365 510 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 179 - -
Mal4g3365 510 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 312 506 - -
Mal4g3365 510 Pfam Membrane transport protein 10 501 IPR004776 GO:0016021|GO:0055085
Mal4g3365 510 TIGRFAM 2a69: auxin efflux carrier 1 505 IPR014024 -
Mal4g3365 510 MobiDBLite consensus disorder prediction 308 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3365 Mal-Chr4 98517637 98521373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3365 1 506 Organic Solute Cotransporters AT1G23080 40.291 1.14e-140 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3365 K13947 - sly:100527966 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5204 5 125978957 125981638 Mal4g3365 4 98517637 98521373 PCT