Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5180 ATGGAGAATTTAGTTAGGAAAAAGTTATTTATCTTGTTATTATTTTTGTGGATTTGTGCAGTCACTGCATCTGTGACTTATGATCACAAGGCCATTCTTGTTAATGGACAGAGAAGATTTTTATTTTCTGGGTCCATTCATTATCCAAGAAGCACACCTGAGATGTGGCCAGACCTTATTCAAAAGGCTAAAGATGGAGGCTTAGATGTTATACAAACTTATGTATTTTGGAATGGACATGAGCCTGCTCCTGGACAGTATTATTTTGAAGATAGGTACGATTTGGTTAAGTTCATCAAGGTGGTGCAACAAGCTGGCCTTTATGTTCATCTTCGCATTGGTCCCTACGCATGTGCTGAATGGAACCTTGGAGGATTTCCAGTTTGGCTCAAATATGTTCCGGGCATTGCATTCAGAACAGACAACGAGCCTTTCAAGGCGGCAATGCAAAAGTTTACAACTAAGATTGTCAACATGATGAAAACAGAGAAATTGTTTCAAACACAGGGAGGTCCAATAATTCTGTCTCAGATAGAGAACGAGTATGGACCAGTGGAGTGGGAAATTGGTGCTCCTGGAAAAGCTTACACGAAATGGTTTGCTCAAATGGCTGTAAGTTTAGATACTGGTGTACCATGGATCATGTGCAAGCAAGAAGATGCTCCTGATCCTATTATTGATACTTGCAATGGTTACTACTGTGAAAACTTCAAACCCAACAAGAACAACAAACCCAAAATGTGGACTGAGAATTGGACTGGCTGGTACACAGAGTTTGGTGGTGCAGTTCCACGTAGACCAGCAGAAGACGTGGCATTCTCTGTTGCAAGGTTTGTACAAAATGGTGGCACATTTGTTAACTACTATATGTATCATGGAGGAACTAACTTTGATCGAACTTCTGGTGGACCCTTCATTGCTACAAGCTATGACTTTGATGCTCCCCTTGATGAATTTGGACTTTTAAACCAGCCAAAATGGGGGCATTTGAATGAATTACATAAGGCAATTAAGCTATGTGAACCAGCTTTATTGTCTGTTGATCCCACAGTAACATGGCCTGGAAAAAATCTCGAGGTACATGAGTTCAAGACAAATACTGGTGCTTGTGCTGCCTTCCTTGCGAATTATGACACCAAAATTGCGGCAACGGTTAAATATGGAGGTGGACAACATGAACTACCACCTTGGTCTATTAGCATTCTTCCTAATTGCAAAACTGCAGTTTTAAACACTGCAAGGCTTGGTACTCAAAGTTCCTTAATGAAGATGACTGCTGCAAACAGTGCACTTACTTGGCAGTCATATATTGAAGAGCCAGCATCATCTAATGAACATGATTCCCTCACAGCATATGCATTATGGGAGCAGATTAATGTCACTAGAGATTCTACGGACTACTTGTGGTATATGACAGATGTCTACATTAATCCGAATGAAGGTTTTATAAAGAATGGACAATCTCCTCTTCTTACAATAATGTCAGCTGGCCATGCTATGCATGTTTTCATTAATGGGCAACTTTCAGGTTCTATGTATGGATCATTGGAGTTTCCTAAATTGACATTTAGCAAAAATGTTAAGCTAAGTGCTGGAAATAACAAGATCTCTTTGCTTAGCATTGCTGTCGGTCTCCCGAATGTTGGCGTTCACTTTGAGACATGGAATGTCGGGGTCTTAGGCCCGGTCACACTCAAGGGTCTAAACGAGGGGACCAAAGACTTGTCACGACAGAAATGGTCTTATAAGATTGGTCTGAAGGGTGAAGCCTTAAAACTTCCCACTGTAAGTGGAAGTTCATCAGTTCAATGGGTACAAGGATCATCATTGGCTAAAAGACAACCTTTAACATGGTACAAGACAACTTTTAGCACACCAGCAGGCAATGATCCATTAGCTCTAGATATGAGTAGTATGGGAAAGGGCCAAGTATGGATAAATGGTCGAAACATTGGACGTCATATGCCTGGATATATAGCACGCGGTAAATGTGGCGATTGTTACTATGCCGGAACTTATACCGAGACAAAATGTCGAACAAATTGTGGACAACCCTCTCAGAAACGGTACCATGTTCCTAGGTCATGGTTGAACCCAAGTGGGAATTATTTGGTTGTGTTTGAAGAATGGGGAGGTGATCCTAATGGAATATCTTTGGTGAAAAGAACAACAGGAAGTGTGTGTGCTGATATATATGAAAATCAGCCAACACTTAGGAACAAAGCTGTTAGACTTGCTAACTTGTGGTGTCCCATTGGACAAAAGATCACCCAAATTAAATTTGCTAGCTATGGATTGCCACAAGGAACTTGTGGAAACTATCGAGAGGGAACTTGTCATGCTCACAAATCATATGATGCTCCTCAAAGGGACTGCATTGGCAAGCAATCTTGCATGGTAACTGTAGCTCCTCAAGTTTTTGGGGGAGACCCGTGTCCAAGAATTGCAAAGAAGTTCTCTGTTGAAGCCCTATGCAGCTAG 2481 0.4131 MENLVRKKLFILLLFLWICAVTASVTYDHKAILVNGQRRFLFSGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPAPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPYACAEWNLGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTTKIVNMMKTEKLFQTQGGPIILSQIENEYGPVEWEIGAPGKAYTKWFAQMAVSLDTGVPWIMCKQEDAPDPIIDTCNGYYCENFKPNKNNKPKMWTENWTGWYTEFGGAVPRRPAEDVAFSVARFVQNGGTFVNYYMYHGGTNFDRTSGGPFIATSYDFDAPLDEFGLLNQPKWGHLNELHKAIKLCEPALLSVDPTVTWPGKNLEVHEFKTNTGACAAFLANYDTKIAATVKYGGGQHELPPWSISILPNCKTAVLNTARLGTQSSLMKMTAANSALTWQSYIEEPASSNEHDSLTAYALWEQINVTRDSTDYLWYMTDVYINPNEGFIKNGQSPLLTIMSAGHAMHVFINGQLSGSMYGSLEFPKLTFSKNVKLSAGNNKISLLSIAVGLPNVGVHFETWNVGVLGPVTLKGLNEGTKDLSRQKWSYKIGLKGEALKLPTVSGSSSVQWVQGSSLAKRQPLTWYKTTFSTPAGNDPLALDMSSMGKGQVWINGRNIGRHMPGYIARGKCGDCYYAGTYTETKCRTNCGQPSQKRYHVPRSWLNPSGNYLVVFEEWGGDPNGISLVKRTTGSVCADIYENQPTLRNKAVRLANLWCPIGQKITQIKFASYGLPQGTCGNYREGTCHAHKSYDAPQRDCIGKQSCMVTVAPQVFGGDPCPRIAKKFSVEALCS* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5180 826 PANTHER BETA-GALACTOSIDASE RELATED 7 723 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 ProSiteProfiles SUEL-type lectin domain profile. 746 826 IPR000922 GO:0030246
Mal5g5180 826 Pfam Beta-sandwich domain in beta galactosidase 344 414 IPR041392 -
Mal5g5180 826 Gene3D - 431 579 - -
Mal5g5180 826 Gene3D Glycosidases 18 340 - -
Mal5g5180 826 Gene3D - 586 727 - -
Mal5g5180 826 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Mal5g5180 826 SUPERFAMILY Galactose-binding domain-like 579 740 IPR008979 -
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 247 262 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 284 299 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 641 657 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 304 320 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 614 628 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
Mal5g5180 826 PANTHER BETA-GALACTOSIDASE 7 723 - -
Mal5g5180 826 SUPERFAMILY (Trans)glycosidases 24 341 IPR017853 -
Mal5g5180 826 SUPERFAMILY Galactose-binding domain-like 399 569 IPR008979 -
Mal5g5180 826 Pfam Galactose binding lectin domain 748 825 IPR000922 GO:0030246
Mal5g5180 826 Pfam Glycosyl hydrolases family 35 32 336 IPR031330 -
Mal5g5180 826 Gene3D - 739 826 IPR043159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5180 Mal-Chr5 125718191 125737410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5180 1 826 Glycoside Hydrolase AT3G13750 66.944 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5180 - - gmx:106795462 1485.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5180 5 125718191 125737410 Mal4g3340 4 97831335 97837269 PCT