Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3340 ATGCCTTTAGTAGTTACGTGTGAAGAAAAAAAAAATTGGAAATGGGTCCCATACATTACTCCCTCCTCTTCCTATCTATCTCAAAATTCTATAAAAAGCAGTTGCATTTTTATTCCCTCCACTTCAACTCACCCATCAAACCAATACACCTCACCTTTTAACAAATACACCCCCCTCTCATATAAAGTGATTCAACAAACTCTCCTTCAACAAAAACTAGAAACTGTTTTCTCTTTGTCCCTCCATTACCTTTTTAATGTTTTAATGGAGAATTTAACAAGGGGGAGAAATTTTTACATGGTGATGGTGTTGGTGTTACTATTTTTGTGTTTATGTGTTTGTTCTGTTACAGCTTCTGTGACTTATGATCATAAAGCTATTGTAATTAATGGCCAGAGAAGAATTTTGATATCTGGTTCCATCCACTATCCAAGAAGCACACCTGAGATGTGGCCAGATTTAATTCAAAAGGCTAAAGATGGAGGTGTTGATGTGATTGAAACATATGTATTTTGGAATGGACATGAACCTTCTCAAGGAAAATATTACTTTGAAGATAGATTTGACTTGGTTAAGTTTATCAAAGTGGTTCAACAAGCTGGACTTTATGTTCACTTGCGTATTGGTCCCTTTGTTTGTGCTGAATGGAATTTTGGGGGATTTCCTATTTGGCTAAAGTATGTACCAGGTATTGCTTTCAGAACAGACAATGAACCGTTCAAGGCGGCTATGCAAAAATTCACTGCTAAGATTGTCAGTATTATGAAGTCAGAGAAGTTGTTTCAAAGCCAAGGTGGTCCAATTATTTTGTCTCAGATTGAGAATGAGTATGGACCAGTGGAATGGGAAATTGGTGCACCTGGTAAAGCTTACACCAAATGGTTTTCTCAAATGGCTGTAGGACTAGACACTGGTGTTCCATGGGTTATGTGTAAGCAAGAAGATGCTCCTGATCCTATTATTGATACCTGCAATGGATATTACTGCGAAAACTTCTCTCCCAACAAGAACTACAAACCAAAAATGTGGACTGAGAATTGGACTGGCTGGTACACTGATTTCGGTACTGCTGTCCCTTATAGACCAGCAGAAGACTTGGCATTCTCAGTTGCCAGATTCATACAGAATCGCGGCTCATATGTTAACTACTATATGTACCATGGAGGAACTAATTTTGGAAGAACATCTGCTGGCCTTTTTATTGCCACGAGTTATGATTATGATGCTCCTATCGATGAATACGGACTTATAAATGAACCAAAATGGGGGCATCTAAGAGATTTACATAAAGCAATTAAGCAATGTGAGTCGGCTTTAGTGTCTGTGGATCCGACAGTGTCATGGCCTGGAAAAAACCTTGAGGTACACGTTTATAAGACAAGCTTTGGTGCCTGTGCTGCATTCCTTGCAAATTACGACACTGCATCGTGGGCAAAAGTTCCATTTGGAAATGGCAAATACGACCTACCACCTTGGTCTATCAGTATTCTTCCTGACTGCAAAACTGAGGTTTTCAACACTGCAAAGGTCCGTGCACCAAGGTTACATAAAAAGATGACACCTGTTAACAGCGCGTTTAATTGGCAGTCGTACAGCGAACAACCTGCCGCCTCCGGTGAAAGTGATTCCTGGACAGCAAATGGACTTTTGGAGCAGCTCAGTCAGACCTGGGATAAGTCAGATTATTTGTGGTACATGACAGATGTCAACATTAGTCCTAATGAAGGTTTTATAAAGAATGGCCAAAATCCTGTTCTTACTGCAATGTCGGCCGGCCATGTTCTGCATGTTTTTGTTAACGGTCAACTTTCAGGAACTGCATATGGATCATTGGAGAATCCTAAATTAACATTTAGTAATAGTGTGAAGTTGAGGGTTGGCAATAACAAGATTTCTCTACTTAGTGTTGCCGTCGGTCTCTCGAATGTTGGCTTGCACTTTGAAAGATGGAATGTTGGGGTGTTAGGCCCAGTAACATTGAAGGGTCTTAATGAGGGGACAAGAGATTTGTCAAAACAAAGATGGTCTTACAAGATTGGACTGAAAGGTGAATCCTTGAACCTTCATACCACAACTGGAAGTTCCTCTGTTAAATGGTCTCAAGGTTCATTTTTAGCTAAGAAACAACCTTTGACATGGTACAAGACAACTTTCAACGCGCCGGCTGGAAACGATCCATTGGCTCTAGATATGAGTGGCATGGGAAAGGGAGAAATATGGGTGAACGGTCAGAGCATTGGTCGCCATTGGCCAGGATATATCGCACGTGGTAATTGTGGCAGTTGCAACTATGCCGGAACATTTACCGATAAAAAATGTCGAACAAGTTGTGGACAACCCACCCAAAAATGGTATCATATTCCTCGCTCGTGGTTGAACCCAAGCGGGAACTTCTTGGTTGTGTTGGAAGAATGGGGAGGTGACCCTACCAGAATTTCATTGGTGAAAAGGACATGA 2457 0.4086 MPLVVTCEEKKNWKWVPYITPSSSYLSQNSIKSSCIFIPSTSTHPSNQYTSPFNKYTPLSYKVIQQTLLQQKLETVFSLSLHYLFNVLMENLTRGRNFYMVMVLVLLFLCLCVCSVTASVTYDHKAIVINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGVDVIETYVFWNGHEPSQGKYYFEDRFDLVKFIKVVQQAGLYVHLRIGPFVCAEWNFGGFPIWLKYVPGIAFRTDNEPFKAAMQKFTAKIVSIMKSEKLFQSQGGPIILSQIENEYGPVEWEIGAPGKAYTKWFSQMAVGLDTGVPWVMCKQEDAPDPIIDTCNGYYCENFSPNKNYKPKMWTENWTGWYTDFGTAVPYRPAEDLAFSVARFIQNRGSYVNYYMYHGGTNFGRTSAGLFIATSYDYDAPIDEYGLINEPKWGHLRDLHKAIKQCESALVSVDPTVSWPGKNLEVHVYKTSFGACAAFLANYDTASWAKVPFGNGKYDLPPWSISILPDCKTEVFNTAKVRAPRLHKKMTPVNSAFNWQSYSEQPAASGESDSWTANGLLEQLSQTWDKSDYLWYMTDVNISPNEGFIKNGQNPVLTAMSAGHVLHVFVNGQLSGTAYGSLENPKLTFSNSVKLRVGNNKISLLSVAVGLSNVGLHFERWNVGVLGPVTLKGLNEGTRDLSKQRWSYKIGLKGESLNLHTTTGSSSVKWSQGSFLAKKQPLTWYKTTFNAPAGNDPLALDMSGMGKGEIWVNGQSIGRHWPGYIARGNCGSCNYAGTFTDKKCRTSCGQPTQKWYHIPRSWLNPSGNFLVVLEEWGGDPTRISLVKRT* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3340 818 Gene3D Glycosidases 113 435 - -
Mal4g3340 818 SUPERFAMILY Galactose-binding domain-like 494 664 IPR008979 -
Mal4g3340 818 SUPERFAMILY (Trans)glycosidases 120 436 IPR017853 -
Mal4g3340 818 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 265 277 IPR019801 GO:0004553|GO:0005975
Mal4g3340 818 Pfam Glycosyl hydrolases family 35 127 431 IPR031330 -
Mal4g3340 818 PANTHER BETA-GALACTOSIDASE RELATED 101 818 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 SUPERFAMILY Galactose-binding domain-like 674 813 IPR008979 -
Mal4g3340 818 Pfam Beta-sandwich domain in beta galactosidase 439 510 IPR041392 -
Mal4g3340 818 Gene3D - 545 670 - -
Mal4g3340 818 Gene3D - 681 818 - -
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 379 394 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 342 357 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 206 225 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 736 752 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 263 278 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 130 147 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 151 169 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 709 723 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PRINTS Glycosyl hydrolase family 35 signature 399 415 IPR001944 GO:0004553|GO:0005975
Mal4g3340 818 PANTHER BETA-GALACTOSIDASE 101 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3340 Mal-Chr4 97831335 97837269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3340 31 818 Glycoside Hydrolase AT3G52840 64.340 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3340 - - gmx:100810170 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3340 4 97831335 97837269 Mal4g3340 4 97831335 97837269 ECH
Mal5g5180 5 125718191 125737410 Mal4g3340 4 97831335 97837269 PCT