Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5171 ATGACAAGGTATTTTCTACTTTCGAAAGCTTTGATTATTCTACTATGTCTTAATATTGTAGTGCACACAAAACAAGCACAAGCACAACCATGGTCACCACTTGATGCACCAAAAGAAATTCTCCAAATGCTTAGTCGTGACCCTCTAACCCTTTCACTAGCCTCAACCGATTTTGGTCACATAGTTCACCAAAACCCATTTGCAATTTTTGCACCATCGTCTATTAATGACATATCAAAATTGATAAAATTCTCAAATTCCCTTCCTATCCCTTTTACTATAGCTGCAAGAGGGCAAGGACATTCAGTTAATGGACAATCCATGACAAATGATGGGGTTGTGGTGAACATGACTGAATTGAATAGTAATGGATTTAAAAAAAATGGGAGTGGAATAGTAGTGTTCGATAAATATGTAGATGTTGGTGGTGGACAACTTTGGATTGATGTGTTGCATGCAAGCCTTGAAAAAGGACTTACACCACTCTCTTGGACTGATTACTTGTATTTATCGGTTGGTGGAACTCTCTCTAATGCTGGTATTAGTGGACAAACCTTCCAATTTGGTCCTCAGATTTCCAATGTTCATGAATTGGATGTTATTACAGGGGAAGGAGACTTGGTGACTTGTTCTACGGAGAAGAACTCAGAATTATTTTATGCCGTTCTTGGAGGTTTAGGCCAATTTGGAATTATAACCCGGGCAAGAATAGCTCTTGGGCCTGCACCCAAGAGGGTTAAGTGGCTCCGTTTATTGTACAACGACTTCTCTGCATTTTCTGGAGACCAAGAGCATTTAATCTCATTCAATGGAATAAATGAAACGAATGCACCCAATTATGTAGAAGGCGCCTTGCTTCTAAATCAGCCACCATTAGACCTATTCTTTTATCCAGAAATTGATCAACCTCGCATATCTTCCTTGGTAAACCAATATGGCATTATCTACATCATTGAGCTTGCCAAATATTACGACGAAAACTCTCAAGATCATGTTGATCAGGAAATTGAAATTTTGCTTGAGGGATTAAAGTTTGTCCCAACTTTTAAATTCGAAAAAGATGTGTCGTACGAAGAATTTCTAGATAGAGTTCATACTGATGAACTAACACTAAGGACACAAGGGCTTTGGGATATCCCACATCCTTGGTTAGACTTATTTGTTCCAGGATCTAGAATGTCTGAATTTGATGAAGGTGTGTTCAAGGGTATTATCCTTAAACAAAACATTACCGCAGGACTTGTATTAGTCTACCCAGTGAACCGAACAAAGTGGAATGATAAGATGTCAGCAGTTACACCTAATGAAGAAATTTTCTACGTTGTGGACTTTTTGCGTGCAACTGGGTTTGATAAATTGGAAGCATATAAGGCTCAAAACCAACAAATATTGCAATTCTGTAAGGATGTTGGTATAGAAGTCAAACATTATCTTCCCCTAAACAGAACACATGAAGAATGGGTGGAACAATATGGCCTCAAATGGAATGCTTTTGAGAAAAGAAAAGCTCAATTTGATCCAAATAAAATATTGTCACCTGGACAAGGGATTTTCAATTAA 1560 0.3795 MTRYFLLSKALIILLCLNIVVHTKQAQAQPWSPLDAPKEILQMLSRDPLTLSLASTDFGHIVHQNPFAIFAPSSINDISKLIKFSNSLPIPFTIAARGQGHSVNGQSMTNDGVVVNMTELNSNGFKKNGSGIVVFDKYVDVGGGQLWIDVLHASLEKGLTPLSWTDYLYLSVGGTLSNAGISGQTFQFGPQISNVHELDVITGEGDLVTCSTEKNSELFYAVLGGLGQFGIITRARIALGPAPKRVKWLRLLYNDFSAFSGDQEHLISFNGINETNAPNYVEGALLLNQPPLDLFFYPEIDQPRISSLVNQYGIIYIIELAKYYDENSQDHVDQEIEILLEGLKFVPTFKFEKDVSYEEFLDRVHTDELTLRTQGLWDIPHPWLDLFVPGSRMSEFDEGVFKGIILKQNITAGLVLVYPVNRTKWNDKMSAVTPNEEIFYVVDFLRATGFDKLEAYKAQNQQILQFCKDVGIEVKHYLPLNRTHEEWVEQYGLKWNAFEKRKAQFDPNKILSPGQGIFN* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5171 519 Pfam FAD binding domain 68 211 IPR006094 GO:0050660
Mal5g5171 519 Gene3D - 117 244 IPR016169 -
Mal5g5171 519 ProSiteProfiles PCMH-type FAD-binding domain profile. 62 242 IPR016166 GO:0071949
Mal5g5171 519 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 66 101 IPR006093 GO:0016491
Mal5g5171 519 PANTHER GULONOLACTONE OXIDASE 8 519 - -
Mal5g5171 519 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 519 - -
Mal5g5171 519 SUPERFAMILY FAD-linked oxidases, C-terminal domain 243 519 IPR016164 GO:0003824|GO:0050660
Mal5g5171 519 Gene3D - 245 477 IPR016170 -
Mal5g5171 519 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 241 IPR036318 GO:0050660
Mal5g5171 519 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 243 518 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mal5g5171 519 Gene3D - 49 518 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5171 Mal-Chr5 125614990 125625467 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5171 11 246 Miscellaneous Gene Families AT1G30730 25.197 1.91e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5171 K00279 - gmx:100808553 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5171 5 125614990 125625467 Mal4g3332 4 97490944 97497080 PCT