Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3332 ATGGTGACAAATTTTATGATTTCAATTCTTAGTGCTTTGCTATACCTATCCATCATAGTATTCATCACAGATGGAAAACCACTCAACTTCCAAGAAATCCCAATCCCCAAAGAACTAGCCCTAAAGCTTAGTAGTAACTCACAAATCCTTTCTCAAGCCTCAACCGATTATGGCCACATTATTCATGAAAGCCCTTTTGCAGTTTTGGAACCAACATCAATTAGTGATATTGCTAACTTGATAAACTATTCAAACTCTCTTCCTCACCCTTTTACCATATCCTTTAGAGGACAAGGCCATTCAGTTCTTGGACAAGCCATGGCACAAAATGGGATTGTTGTGAATATGACTCAACTTAGAGTGTTTAGAAATGAGAGTGGAATTATAGTGTCTAATTGTGATGTGAAAAATCCATTAGGTTGTTATGTTGATGTGGGCGGAGAACAATTGTGGATTGATGTTTTGCATGAAACACTTAAGCATGGACTCACACCTCTCTCTTGGACTGATTACTTGTATTTGACTGTTGGTGGCACTCTCTCTAATGCTGGGGTTAGTGGCCAAACTTTTAGATTTGGACCTCAAATCTCAAATATTCTTGAATTGGATGTTATAACAGGGGAAGGAAACATTGTGACTTGTTCACCAGAAAAGAACTCAGAGGTATTTTATGCCGTTCTTGGAGGACTAGGTCAATTTGGAGTGATAACAAGAGCAAGAATACCTCTTGGACCCGCACCAACAAGGGTGAAGTGGTTGCGTCTAATTTACAATGACTTTTCTGCATTTTCAGCAGACCAAGAACATTTAATCTCATTCGATAAAAGAAATGACACCAATGGAGCAGATTATGTTGAAGGCATGCTTCTATTGAACAAACCACCATTGGATCTTTCCTTTTATCCAGCTACTGATCAACCAAGGATAACCTCCCTAGTAACTAAATATGGCATCACCTATGTCCTAGAGCTTGTCAAATATTATGACACAAATTCTCAAGCACTTATCGCAGAGGAAGTTGACAGTTTGGTCAAAGGATTAAAGTTTATTCCAACGTTTATTTTCCAAAAAGATGTGACATATGAGGAATTTCTAGACAGAGTTCATACAAATGAGTTAGTTCTTAGGTCAAAAGGACTTTGGGATGTTCCTCATCCTTGGTTGAATATGTTCATACCAAAATCTAGAATCTTGGATTTTAATGAAGGTGTTCTCAAGGGTATTATGCTTAAGCAAAATGTTTCTGCAGGAATTTTCCTAATCTACCCCATGAACGGCAACAAGTGGGATGATAGGGTGTCAGCAATTACACCAGATGAAGATGTGTTCTACGCTTTAGCTCTTTTGAATGCTGCAAATGAATTGGATGAAGTGAAGACATTGCAGGCTCAAAATCATCAGATATTACAATTTTGTAATGATGCTGGTATTAAGATTAAGGAATATCTTACGGGAAACAAAACGCATGAAGAATGGATTGAACACTTTGGACCCAAATGGCAACTTTTTGAAGATAGAAAAGCTAAATTTGATCCCAAAAGAATATTGTCACCTGGACAAGGGATTTTTTAG 1572 0.376 MVTNFMISILSALLYLSIIVFITDGKPLNFQEIPIPKELALKLSSNSQILSQASTDYGHIIHESPFAVLEPTSISDIANLINYSNSLPHPFTISFRGQGHSVLGQAMAQNGIVVNMTQLRVFRNESGIIVSNCDVKNPLGCYVDVGGEQLWIDVLHETLKHGLTPLSWTDYLYLTVGGTLSNAGVSGQTFRFGPQISNILELDVITGEGNIVTCSPEKNSEVFYAVLGGLGQFGVITRARIPLGPAPTRVKWLRLIYNDFSAFSADQEHLISFDKRNDTNGADYVEGMLLLNKPPLDLSFYPATDQPRITSLVTKYGITYVLELVKYYDTNSQALIAEEVDSLVKGLKFIPTFIFQKDVTYEEFLDRVHTNELVLRSKGLWDVPHPWLNMFIPKSRILDFNEGVLKGIMLKQNVSAGIFLIYPMNGNKWDDRVSAITPDEDVFYALALLNAANELDEVKTLQAQNHQILQFCNDAGIKIKEYLTGNKTHEEWIEHFGPKWQLFEDRKAKFDPKRILSPGQGIF* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3332 523 ProSiteProfiles PCMH-type FAD-binding domain profile. 61 246 IPR016166 GO:0071949
Mal4g3332 523 Gene3D - 48 523 IPR016167 -
Mal4g3332 523 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 247 523 IPR015345 GO:0009690|GO:0019139|GO:0050660
Mal4g3332 523 Gene3D - 116 248 IPR016169 -
Mal4g3332 523 Pfam FAD binding domain 67 215 IPR006094 GO:0050660
Mal4g3332 523 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 65 100 IPR006093 GO:0016491
Mal4g3332 523 PANTHER GULONOLACTONE OXIDASE 12 523 - -
Mal4g3332 523 SUPERFAMILY FAD-binding/transporter-associated domain-like 45 245 IPR036318 GO:0050660
Mal4g3332 523 SUPERFAMILY FAD-linked oxidases, C-terminal domain 247 523 IPR016164 GO:0003824|GO:0050660
Mal4g3332 523 Gene3D - 249 482 IPR016170 -
Mal4g3332 523 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 12 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3332 Mal-Chr4 97490944 97497080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3332 K00279 - gmx:100793158 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5171 5 125614990 125625467 Mal4g3332 4 97490944 97497080 PCT