Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5134 ATGTTCCCAAAAGTTAAAGGTGGTGAAGAAGATTTGTTAAAAGATGTTGAAACTATAAGAAAAAATCTATACTTGGGAAAAAGCCATTCTGAGAATTCAACATCATCATCAAAATCCAAGCACAATGATCCAAAACCTGAAAAAGAAGATACTAACTTGAAAAAGGATAAAAAATCCATATGGAATTGGAAGAAGCCATTAAGAGCATTTTCCCTTTCAAAGAGTAAGAAATTCAATTGTTGTTTTTCTCTTCAAGTTCATTTCATTGAAGGGTTACCTTTGAGTTTCAATGATTCAACTCTTTGTGTTCATTGGAAACGGCGCGATGAACATTTGGTTACCCCTCCGGCAAAAGTGATTCAAGGGGTTGCTAAGTTTCAGGATATTTTGAATTATACTTGTTCAATTGTTGGAAGTAAAAGTGGATCATATAATTCTGCTAAGTATGAAGCTAAGCATTTTTTGCTTTATGCTTCAGTGCTTGGTGTTCCTGAACTTGATTTAGGGAATCATCGTATGGATATTACACGGTTGCTTCCTCTTTCATTGGATGATCTTGAAGAGGAGAAGAATTCGGGGAAGTGGAGTACAAGTTTTAGATTATCAGGAAAGGCTAAAGGTGCTGTGATGAATGTGAGTTTTGGGTATATGGTGGTTGGTGATAACAATGCTTGTGCTCCTAATGTATTGACTTCGAGGCAAAACTGTTTGGCTTTGAGCGAAACGGATTTGAATCCGTGTCAGTATTCATCTCGTGTTATAGATGAGGTGAAGGATCTTCATGAGGTGTTGACATCATCAAAATCAGTACAGGCCAGTTCAACAGATGTCTTATGTAAGAAATTTGATGATGAAAACAGATGTAGTCCACTGCACAAGAAAGATGAACTTGTGCTAAAAGAGAATCTTGAGCAGATCAAATTTGATGTGTTTCAAGAAAACTTGGAGACAGTTGAGCCAGATGGTGTTTTTACACCCGTGTTTGTAAAAGAGAATTATGATGAATGTGAATGTGATGAATTTTCTGTTGTTGATCAGGGTGTTGAATTTTCATCAAATGAACATGTTAAACTGGAGGAATCCATTGTAGAAGCTAATGTTGATAGTTCTAAGGAAAGCACTATGGTACATGAAGTTTCTAACAAAAAGGATGAGTTATACACCAAAGAGCTTCTCCTGCAAGAAATAGAATCAGTTTTAAATAGTGTCTCAGAGTTGGAGACAGTGGCAATGGAATCTCCTAAAATTATGGAAGTCACATCTGAAAGTAAGTTTAGAAAGTCTCAAAGCTTGGATGATTGCACCGAATCAGTTGCCAGTGAATTCTTGAGTGTTCTAGATGCAGACGATAGTCCAATAGGCTTTAGTTCTGAAAGTGAGCCTGAGTCTCCGAGAGAGCGCCTTTTAAGACAATTTGAGAAGGACATTGGATCTGAGATCTTCTCTTTATTTGATATGGACACATGTTATGATGATGATGATGATGAAGAAGAAGAAGAAGAAGATTGTGATTATGGTGCTTCTTTTGGATCTGAGCAGTGGAAGTTCTCTACAAGTATTAAGCCACCATCCTTGTTGCATGATCTGCAGGAAGGGCTTGAATTTGAGGATGCGAAGAGCAAACTGAAGGGCCATATAATAGAAGACTTGGAAACAGAAGCCTTAATGCGCGAGTGGGGTTTGAATGAGGAGGCTTTTCAACATTCTCCAACAAAAGGCTTTGCTGGTTTTGGAAGTCCAATACATCAACTACCTGAAGAGCCTCCTAGCTTACCTCCTCTGGCAGAAGGGTTTGGTCCTTTCCTCCAGACAAAAGATGGGGGATTTCTAAGGTCTATGAATCCCTCACTTTTTATGAATGCTAAAAGTGGTGGAAACTTAATCATGCAGGTTTCCAACCCTGTTGTTATGCCTGCAGAAATGGGTTCAGGGATAATGGAGACTTTGCAATATTTGGCATCAGTCGGAGTTGAAAAGCTTACGATGCAGGCGAACAAGTTTATGCCTCTGGAAGATATCACAGGGAAGACAATGCATCAAATATTATGGGAAGCTATGCCAAGTTTAGAGGGAAAAGACAGGCAATGCCATTTGCAGCATGATTTGGTGACAGGGAAAGGCTCTACTTGCGTGCAAAGGGACTTGAAAGGATCATCATCAGGACTAAAGTCTGATCAGTTTACTTCAAGTTCAATTGGCAACCAGGGAGGTTCTGGTTTTTTTTCATTGGAAGATCTTGCTCCTTTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTAAAAATACAATCTGGGATGTCGGAGGAAGATGCGCCATCAGACATCATTGCACAATCCTTTAGAGATCTTTCTGGTCTCCAAGCCAAGGGGGTTAACATTGGGGGTTCTCTTGGCCTGGATGGAGCTGCTGCTCTGCCGTTGTTGGATATCAAAGACAGTAGCGATGAAGTTGATGAGATAATGGGATTATCATTAACTCTTGATGATTGGATGAGACTGGATTCAGGTGAGATTGATGATATAGATGATATCAGTGCGCATACTTGCAAACTTCTTGCTGCCCATCATGCCAACTCTTTCGACGTAATCCGTGAGAGTTCAAAGGGAAGGAAGAAACAAGGTAAAAGTCATGGCAGGAAATGTGGTTTGCTGGGAAACAATTTCACAGTGGCATTAATGGTGCAACTTCGTGATCCTCAGAGAAATTATGAGCCTGTTGGAACACGAATGCTTGCTCTTATACAAGTCGAGAGAGTGTTAGTCCCACCAAAGCAAAAGATTTACTCGAATGTGTCTCACGTAGGGAACAATAGTGATGAGGATGATGAGTGTGAAATACAAGAAAAGGTAGAGGTGAAAGACAACAAAGAGGAGAGAAGTGCTAAAGAAAGTGGCATTGCTCAGTTCAGGATTACAGAAATTCATGTTGCAGGTCTTAAGATTGAGTCAAACAAAAAGAAGCTTTGGGGTGCATCAAGTAAGCAACAGTCAGGTTCCCGTTGGTTAATTGCTAATGGAATGAGCAAGAGCAATAAGAATCCATTGATGAAGTCTAAGGCTGCTTCTAAATTTGGTGCTCAGGTCACCACCACAAAGGTGCAACCTGGGGACACATTGTGGAGCATATCATCTCGTATTTATGGTACTGGTGCAAAATGGAAGGATTTGGGAGCACTAAATCCACATATAAGAAATCCCAATATCATTATACCAAATGAATCTATAAGAATACGTTGA 3243 0.3972 MFPKVKGGEEDLLKDVETIRKNLYLGKSHSENSTSSSKSKHNDPKPEKEDTNLKKDKKSIWNWKKPLRAFSLSKSKKFNCCFSLQVHFIEGLPLSFNDSTLCVHWKRRDEHLVTPPAKVIQGVAKFQDILNYTCSIVGSKSGSYNSAKYEAKHFLLYASVLGVPELDLGNHRMDITRLLPLSLDDLEEEKNSGKWSTSFRLSGKAKGAVMNVSFGYMVVGDNNACAPNVLTSRQNCLALSETDLNPCQYSSRVIDEVKDLHEVLTSSKSVQASSTDVLCKKFDDENRCSPLHKKDELVLKENLEQIKFDVFQENLETVEPDGVFTPVFVKENYDECECDEFSVVDQGVEFSSNEHVKLEESIVEANVDSSKESTMVHEVSNKKDELYTKELLLQEIESVLNSVSELETVAMESPKIMEVTSESKFRKSQSLDDCTESVASEFLSVLDADDSPIGFSSESEPESPRERLLRQFEKDIGSEIFSLFDMDTCYDDDDDEEEEEEDCDYGASFGSEQWKFSTSIKPPSLLHDLQEGLEFEDAKSKLKGHIIEDLETEALMREWGLNEEAFQHSPTKGFAGFGSPIHQLPEEPPSLPPLAEGFGPFLQTKDGGFLRSMNPSLFMNAKSGGNLIMQVSNPVVMPAEMGSGIMETLQYLASVGVEKLTMQANKFMPLEDITGKTMHQILWEAMPSLEGKDRQCHLQHDLVTGKGSTCVQRDLKGSSSGLKSDQFTSSSIGNQGGSGFFSLEDLAPLAMDKIEALSMEGLKIQSGMSEEDAPSDIIAQSFRDLSGLQAKGVNIGGSLGLDGAAALPLLDIKDSSDEVDEIMGLSLTLDDWMRLDSGEIDDIDDISAHTCKLLAAHHANSFDVIRESSKGRKKQGKSHGRKCGLLGNNFTVALMVQLRDPQRNYEPVGTRMLALIQVERVLVPPKQKIYSNVSHVGNNSDEDDECEIQEKVEVKDNKEERSAKESGIAQFRITEIHVAGLKIESNKKKLWGASSKQQSGSRWLIANGMSKSNKNPLMKSKAASKFGAQVTTTKVQPGDTLWSISSRIYGTGAKWKDLGALNPHIRNPNIIIPNESIRIR* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5134 1080 SMART LysM_2 1032 1080 IPR018392 -
Mal5g5134 1080 MobiDBLite consensus disorder prediction 24 55 - -
Mal5g5134 1080 ProSiteProfiles C2 NT-type domain profile. 70 218 IPR019448 -
Mal5g5134 1080 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 8 1079 - -
Mal5g5134 1080 ProSiteProfiles LysM domain profile. 1031 1079 IPR018392 -
Mal5g5134 1080 MobiDBLite consensus disorder prediction 34 55 - -
Mal5g5134 1080 CDD LysM 1034 1079 IPR018392 -
Mal5g5134 1080 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 8 1079 IPR039614 -
Mal5g5134 1080 Pfam LysM domain 1034 1079 IPR018392 -
Mal5g5134 1080 Gene3D LysM domain 1023 1080 IPR036779 -
Mal5g5134 1080 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 74 218 IPR019448 -
Mal5g5134 1080 SUPERFAMILY LysM domain 1031 1079 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5134 Mal-Chr5 125137733 125141075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5134 - - lja:Lj4g3v2179220.1 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5134 5 125137733 125141075 Mal5g5134 5 125137733 125141075 ECH
Mal5g5134 5 125137733 125141075 Mal4g2952 4 88131073 88135038 PCT