Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2952 ATGTTGTCCAGAATGGAAAGTAGTAAGAAGAGTGGTGGGGTTTCTGGAAATCAGAAGAAATTATTAAAGGATGTTGAAACTATGAATAAAGCTATGTACTTGGACAGAAGTGCTTCAAGGAATTCGGTGTCGGGTTCGAATTCTAGGTCTAAAACCGCTGGAAAATCGTTGTTTCCTGATCCGAAACCGAGGGGTAAAGGTAGTAATAGTAATGATGATAATGATGGTTTACAGAAGGATAAAAGGTCTATATGGAATTGGAGGCCGTTGAAGGCACTTTCGCATATCCGAAATAAACGGTTTAATTGTAGTTTTTATCTTCATGTACATTTGATTGAAGGGTTGCCTTCTACTTTTGAGGGTTCGAGTTTTTCGGTGTATTGGAAGAGGAGGGATGGGGTTTTGGTGACACGTTCGGCTAAAGTGGTTCAGTGTGTGGCTGAATTTGATGAGAAGTTGACTTATACTTGCTCGGTTTACGGCAGTAGGAGTGGACCTCACCATTCTGCTAAGTATGAAGCGAAGCATTTTTTGCTTTACGCTTCTCTTCTTAGTGCACCGGAGCTTGATTTGGGGAAACACCGAGTTGATCTCACGAGGTTGCTTCCTCTCACTCTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACCACTAGTTTCAGGTTATCGGGAAAGGCTAAGGGGGCTGTGATGAATGTTAGTTTCGGGTATACGGTTGTTGGTGATAATAACACAATCACAACGAGAGATGGTCATAATGCTCCTAATGTGTTGACTTCGAGGCAGAATAGTCTTGCGTTGACGAAACTAGATGTTAAACCAAGACAGTTTGATGGAAGCAGCAGCGTGAGGCGTGCTGGAAGTTTACAAAACTTTAGCAGTCACTACTCATCTCAAGCTGCGGAAGAGGTAAAGGATCTTCACGAAGTGTTGCCGTCGTCTAAGTCTGCACTAGCCAGCTCAATAGGCGTCTTATATAAGAAATTCGATGAAGAAAAGGCATGTAGCTCTCTGGACAATGAACCTGATCCTGATTTGTCAAAAGAAAATCTCGAGCCAATCAAACCAGATGCATATACTTCCTCTGATATCGGAAAAGAAACGCCTGCAGTGCATTCAGTTAACGATGGAAATACATCCCCAGTGCTTGACACACCTGAATTCGATGCATTTCAAGAAAACCTGGAAACAAATAAACCAGATGGCTATCTTTTACGTGATTCTGAAAAAGAAAACCCTGAAGACTGTCAAGATAAAGAATTTTTTGTTGTTGATAAGGGTATTGAAATCTCACCAATTGAACCTGTTAAAGTAGAGGAGTCATTCACAAAGGCTTCTGAAGATGCTTCTACAGTTGATAGTACTTTTATCTATGATACTGCAGGCTTACAAGTATCTTCTGAAGATAGTTTGATACACGATTCCCTTGATGAGACAAATGATGGTTGTAAGGATCAATCAGTGGTAGATGAATCTGCTTACGAAGAGGATGACTTATTCACAAATGAACTGCTGCAAGAATTAGAATCAGCTATAAATAGTGTCTCAGATTTGGAGACAGCGGCTCTAGAATCTCCTAAAGTTGCGGAGTTCAAATCTGAATATAAGATGACAAAGACACATAGCTTAGACGATGTTACAGAATCGGTTGCGAATGAATTTTTAAGCATGCTAGACATAGACCATAGTTCAGCGGGCTTGAATTCTGAAAGCGAGCCCGAGTCTCCAAGAGAGCTTCTTTTAAGACAATTTGAGAAGGATGCCCTGGATGGGGGCTTCTCTTTATTTGATTTTGATTTGGACTGTGACGGTGAAGCTGATGATGGCTATGATGCTTCTAATGGCTCTGAGCAGTGGAATTTCTCTGAGGGTATGCATTCATCATCCTTGTTCCAAGACCTTCAGAAGGAGCATCTTGTTGAGTCGCAAGACGTGAGGGGAAAGCAAAGGGCTCAAATGCTAGAAGATTTGGAAACAGAAGCCTTAATGCGTCAGTGGGGTTTGAACGAGAAGGCTTTTCATCATTCTCCACCAAAAGATTGTACTGGTTTCGGAAGTCCAATTCAATTACCCCCTGAAGAGCTTCCTACGTTGCCTCCTCTTGCTGAGGGGTTGGGCTCTTTTCTTCAGACAAAAGACGGAGGCTATCTACGGTCTATGAATCCCTCAATTTTCAAGAATACTAAAGCTGGCGGGAGTTTAATCATGCAGGTTTCCAACCCTGTTGTTGTACCTGCAGAAATGGGTTCTGGGATAATGGAAGTTTTACAGTGTTTGGCTTCAGTGGGAATTGAAAAACTCTCAATGCAGGCAAAAGAGTTAATGCCACTAGAAGATATCACAGGAAAGACAATGCAACAAGTAGCATGGGAAGCTGTGCCTGCCTTAGAAGGAACAGAGAGGCAATGTCATTTGCAGCATGATTCAGTAATAGGTCAAGATACAACTTTTGTGCAAAAGGACTTGAAAGGAACACCACCATCTGGACTGAAGTCCAGCAATTTCAATTCAAGTTCGGTGGCCAACCAAACAAGCTCAGAGTTTGTTTCAATTGAAGATCTTGCACCGTTGGCTATGAACAAAATTGAAGCACTTTCAATGGAGGGGTTGAGAATACAATCTGGGATGTCGGAGGATGATGCACCATCTAACATTGTTGCACAATCCATTGGGGAAATGTCAGCTCTCCAAGGCAAAGGCATTGATATTAACGGATCCCTCGGCATGGAAGGAGCTGCTGGTTTGCAGTTGATGGATGTAAAAGATAGCAGTGATGTTGGTGTTGACGGGATAATGAGCCTATCGTTAACTCTTGATGAGTGGATAAAGCTGGATTCTGGTGACATTGACGATGTAGATAATATTAGTGAGCATACTTCGAAACTTCTTGCAGCCCATCATGCTAACTCTTTCGACTTTATTCGTGGGAGTTCAAAAGGAGGAGTTAGGAGACGAGGCAAAGGCTCCGGCAGAAAATGTGGTTTGTTAGGAAACAATTTCACGGTAGCGTTAATGGTGCAGCTTCGCGATCCTCTGAGAAATTACGAGCCTGTCGGGACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTTGTCTTACCAAAGCAAAAAATATTTTGTTGTGTTTCCGAGTTACGGAACAACAACAATGACGAGGATGATGAAAGCGAAATAGTAGCGAAGGTGGAGATGAAGGATACAAATAAAGAGGAGAAAATTTCTGAAGCAGAACGCATTCCTCAGTTCAAGATTACTGAAGTTCATGTGGCAGGTCTTACACCTGAGCCTCAGAAAAAGAAGCTTTGGGGCACCTCGACGCAGCAACAATCTGGTTCACGCTGGTTGCTTGCTAATGGAATGGGGAAGAGCAATAAGATTCCACCAATGAAGTCAAAAGCTGCATCTAAATCAATTGCTCCGGTTACCACAAAGGCGCAGCCTGGTGACACTTTGTGGAGCATCTCTTCGCGCATTTTTGGTTCTGGTAAAAAAGGGAAGGAATTGGCAACACCAAATCCACATGTAAGAAACCCTAATGTCATTTTACCAAATGACACTATTAGACTTAGTTGA 3582 0.4257 MLSRMESSKKSGGVSGNQKKLLKDVETMNKAMYLDRSASRNSVSGSNSRSKTAGKSLFPDPKPRGKGSNSNDDNDGLQKDKRSIWNWRPLKALSHIRNKRFNCSFYLHVHLIEGLPSTFEGSSFSVYWKRRDGVLVTRSAKVVQCVAEFDEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSAPELDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLSGKAKGAVMNVSFGYTVVGDNNTITTRDGHNAPNVLTSRQNSLALTKLDVKPRQFDGSSSVRRAGSLQNFSSHYSSQAAEEVKDLHEVLPSSKSALASSIGVLYKKFDEEKACSSLDNEPDPDLSKENLEPIKPDAYTSSDIGKETPAVHSVNDGNTSPVLDTPEFDAFQENLETNKPDGYLLRDSEKENPEDCQDKEFFVVDKGIEISPIEPVKVEESFTKASEDASTVDSTFIYDTAGLQVSSEDSLIHDSLDETNDGCKDQSVVDESAYEEDDLFTNELLQELESAINSVSDLETAALESPKVAEFKSEYKMTKTHSLDDVTESVANEFLSMLDIDHSSAGLNSESEPESPRELLLRQFEKDALDGGFSLFDFDLDCDGEADDGYDASNGSEQWNFSEGMHSSSLFQDLQKEHLVESQDVRGKQRAQMLEDLETEALMRQWGLNEKAFHHSPPKDCTGFGSPIQLPPEELPTLPPLAEGLGSFLQTKDGGYLRSMNPSIFKNTKAGGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQVAWEAVPALEGTERQCHLQHDSVIGQDTTFVQKDLKGTPPSGLKSSNFNSSSVANQTSSEFVSIEDLAPLAMNKIEALSMEGLRIQSGMSEDDAPSNIVAQSIGEMSALQGKGIDINGSLGMEGAAGLQLMDVKDSSDVGVDGIMSLSLTLDEWIKLDSGDIDDVDNISEHTSKLLAAHHANSFDFIRGSSKGGVRRRGKGSGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFVLPKQKIFCCVSELRNNNNDEDDESEIVAKVEMKDTNKEEKISEAERIPQFKITEVHVAGLTPEPQKKKLWGTSTQQQSGSRWLLANGMGKSNKIPPMKSKAASKSIAPVTTKAQPGDTLWSISSRIFGSGKKGKELATPNPHVRNPNVILPNDTIRLS* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2952 1193 MobiDBLite consensus disorder prediction 1131 1150 - -
Mal4g2952 1193 MobiDBLite consensus disorder prediction 1 15 - -
Mal4g2952 1193 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 98 244 IPR019448 -
Mal4g2952 1193 ProSiteProfiles C2 NT-type domain profile. 93 241 IPR019448 -
Mal4g2952 1193 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1192 IPR039614 -
Mal4g2952 1193 SMART LysM_2 1145 1193 IPR018392 -
Mal4g2952 1193 MobiDBLite consensus disorder prediction 34 54 - -
Mal4g2952 1193 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1192 - -
Mal4g2952 1193 MobiDBLite consensus disorder prediction 337 387 - -
Mal4g2952 1193 MobiDBLite consensus disorder prediction 337 354 - -
Mal4g2952 1193 MobiDBLite consensus disorder prediction 1 78 - -
Mal4g2952 1193 Gene3D LysM domain 1136 1193 IPR036779 -
Mal4g2952 1193 MobiDBLite consensus disorder prediction 368 384 - -
Mal4g2952 1193 MobiDBLite consensus disorder prediction 1166 1193 - -
Mal4g2952 1193 ProSiteProfiles LysM domain profile. 1144 1192 IPR018392 -
Mal4g2952 1193 Coils Coil 503 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2952 Mal-Chr4 88131073 88135038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2952 - - mtr:MTR_2g040970 2073.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2952 4 88131073 88135038 Mal4g2952 4 88131073 88135038 ECH
Mal5g5134 5 125137733 125141075 Mal4g2952 4 88131073 88135038 PCT