Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4845 ATGGCTTTCATAACACATTTCCTCGGCAAACGCCCCCGTCGTTGGTTCTCCGTTGATCACAACCGTCCATCTCCAAATTCTTCAAGATTCAAAAAACGGAAAGTATCATCAACCATGTCGAACAAAACGCCGTCACCGTTATCCACCACCACCAATGCCACTGTTTCCAGAATTTCTCGTTACCCTGAAACCAAACCACCTTTGCATAGAGAAGTTCATGCTCCTTGTAGTAGACCACGCAAATTCGATTTAGCAACTAATTCAAAATCAGAATCGTCAGATTTGATGGCTCCTAATACCACGAATGTGTTAATGGAAAAGTATGAGCGTGCGAAATATTCTGCATTAGCTACTATCCCTTTAAGGGGAAAGGAGAAGAAAAAATGTAATCATAAGGAAGTTGTTTTGGAAGATTCAAATGTCGAAGATGTACTTGAATTGCGGTCTGTGGTGAAAGACCGCAAGTTGAAGAAGATGAAGAAGAAAGGTTTGGTTTGTTTGGATGATAAGGTTGAGGTTGTGAATGGTGCGATTCAGCAACAGTCAACTTCACCTGTGGTTGATGCTGCAAAGATGTTGGATGATTTGTCTTTGAGTTCGGAGAATGATCTTTCGGGTGTTCGTGCTTACAAGAAGTTGCTTGAGGCTGTTGATAAGCGAGGGGATACACTTGCTAGGTTGAAATTTGAAATTCAGCTTAATGAGAAGCGCAAGTCCTCGTTTGGTTTGTTGCGTCCAAAGAAGGAGTTAGTAGAGGTAGCGCCGAAGGAACCTTTTGTTCCTCTTACAAAAGAGGAAGAAGTTGAGGTTGCACAAGCCTTTTCTACCAACCAGAAGAAGGTCTTGGTTAATCATGAGAAATCTAATATTGAGATATCGGGCAAAATGTTTCGGTGCCTTAGGCCAGGTGCATGGTTAAACGATGAGGTGATAAATTTGTACCTTGAGTTGTTGAAAGAGAGGGAGAGAAGAGAGCCGCAGAAGTTTCTGAATTGTCATTTTTTCAGTACCTTTTTCTATAAGAAGTTGATAAGTGGCGAGAATGGTTATGATTACAAATCAGTGAGGAGATGGACTACTCAAAAGAAATTGGGATATGGCTTACATGAATGTGATAAAATATTTGTACCTATTCACCAGCAGATCCATTGGTGCTTAGCTGTTATCAATAAGAAGGAAAAGAAATTTCAGTATCTTGATTCACTGAAAGGAATTGACACACAAGTGCTGGAAGTGCTGGAAAGATATTTTGTAGATGAAGTAAAGGACAAGACTGGAGAAGATGTTGACGTTAGTTATTGGGAAAAAGAATTTGTTGAAGACCTTCCTGAACAGATGAATGGGTATGATTGTGGGGTGTTTATGGTCAAATATGCTGACTTTTATAGCAGAAACTTGAGGCTCTGTTTCAACCAGGAACATATGCCTTACTTCCGGCTTAGGACAGCTAAGGAAATCCTGAGATTGAAAGCTGACTAA 1479 0.4043 MAFITHFLGKRPRRWFSVDHNRPSPNSSRFKKRKVSSTMSNKTPSPLSTTTNATVSRISRYPETKPPLHREVHAPCSRPRKFDLATNSKSESSDLMAPNTTNVLMEKYERAKYSALATIPLRGKEKKKCNHKEVVLEDSNVEDVLELRSVVKDRKLKKMKKKGLVCLDDKVEVVNGAIQQQSTSPVVDAAKMLDDLSLSSENDLSGVRAYKKLLEAVDKRGDTLARLKFEIQLNEKRKSSFGLLRPKKELVEVAPKEPFVPLTKEEEVEVAQAFSTNQKKVLVNHEKSNIEISGKMFRCLRPGAWLNDEVINLYLELLKERERREPQKFLNCHFFSTFFYKKLISGENGYDYKSVRRWTTQKKLGYGLHECDKIFVPIHQQIHWCLAVINKKEKKFQYLDSLKGIDTQVLEVLERYFVDEVKDKTGEDVDVSYWEKEFVEDLPEQMNGYDCGVFMVKYADFYSRNLRLCFNQEHMPYFRLRTAKEILRLKAD* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4845 492 Pfam Ulp1 protease family, C-terminal catalytic domain 305 486 IPR003653 GO:0006508|GO:0008234
Mal5g4845 492 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 31 491 - -
Mal5g4845 492 Gene3D Adenoviral Proteinase; Chain A 250 490 - -
Mal5g4845 492 ProSiteProfiles Ubiquitin-like protease family profile. 290 462 IPR003653 GO:0006508|GO:0008234
Mal5g4845 492 MobiDBLite consensus disorder prediction 20 59 - -
Mal5g4845 492 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 31 491 - -
Mal5g4845 492 MobiDBLite consensus disorder prediction 63 78 - -
Mal5g4845 492 MobiDBLite consensus disorder prediction 18 96 - -
Mal5g4845 492 SUPERFAMILY Cysteine proteinases 258 490 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4845 Mal-Chr5 121623507 121629215 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4845 K08592 - gmx:100797013 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4845 5 121623507 121629215 Mal5g4845 5 121623507 121629215 ECH
Mal5g4845 5 121623507 121629215 Mal4g3879 4 112877014 112883087 PCT