Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3879 ATGGGTGTGACAACAAGCAACCGTAAACGCTCTGAAGAATGCATGTCCGTCGTCAACAACCACACCACAATCTCAATTTCTCAACCATCTTCAAAACGACCCAAATTTTCATCCCAATCGACCCGACCCGTTTCTACCTCAAACGGCATCGTTTCCAGACTCTCCCGTTACCCTGACACCAAACCCCCTATCCTCCGTGAAGTTCACGCGCCGTGCAGACCTAAAAAATTCAACCTTTCCACTAAATTCTCCAGTTTCGATTTCTTCGACGGTGGCGATATCATGGGGAATTTTCTGGCGAGGAATTACGAAAAGGCGAAGCGTTCGGCATTGGGGAAATGCAGATTGGTTGCTCAGAAGGAGAAGGTGGTGATTGATTTGGAGGATTCAGAGGATTCGGATGATTCTGGTGTGGTGGAGGTACTTGAGATTCGTGATACGGAGGAGGCGAAGTTTGTTGAAATTGGGGTTCAGCGGCGGTCAACAGATTCGCCGGATTCGGCATTGACTAATGCGATGGTGGTGAATTTGGAGGAGCATGATCTTTCGAGTGTTCATGTCTATAAGAAGTTGCTTCAGGGTGTTCAGAGAAGGACTGATACGATTCAAAGTTTGAATTTTCAAATTGAGTTGAATGAGAAGAGGAGAGATACTTTTCAATTGTTAAGGCCTAAGAAAGAGTTAGTTGAGGAAGTGCCGTTTGAGCCTTTTGTCCCTCTAACGGATGATGAAGAACATGAAGTTTCTTGCGCGTTTTCTTCCAACCGGAGGAAGATATTGGTTGCTCATGAGAGTTCTAATATTGAGGTATCAGGAGAAAAGATGCGGTGCCTTCTCCCGGGTGCATGGTTAAACGATGAGGTGATTAATTTGTACCTTGAGTTGCTGAAAGAGAGGGAGCGAAGAGAACCAAAGAAGTTTCTAAAATGTCATTTTTTCAACACCTTTTTCTACAAAAAGTTAATAAGTGGCAGGGATGGATATGATTACAAATCAGTGCGAAGATGGACGAGTCAAAGGAAATTGGGATACAACCTATTTGATTGTGATAAAATATTTGTACCCATCCATCAAGAAATTCACTGGTGCCTGGCAGTTATCAATAAAAAAGATGCAAAATTCCAGTATCTTGACTCATTGAAAGGAAAGGATAACCGTGTGCTACAAGTGCTGGCTAGATACTTCGTAGACGAAGTAAAAGACAAATCTGGAAAAGATATTGATGTAAGCACTTGGGAGAAAGAATTTGTCGAAGATCTTCCCGAGCAGGAAAATGGGTTTGACTGCGGCGTGTTTATGATCAAATATGCTGACTTTTATAGCAGAGGCCTGGGACTGTGTTTTAACCAGGAACACATGCCTTACTTCCGGCGCAGGACAGCTAAGGAGGTATTGAGATTGAGAGCTGACTAA 1413 0.4338 MGVTTSNRKRSEECMSVVNNHTTISISQPSSKRPKFSSQSTRPVSTSNGIVSRLSRYPDTKPPILREVHAPCRPKKFNLSTKFSSFDFFDGGDIMGNFLARNYEKAKRSALGKCRLVAQKEKVVIDLEDSEDSDDSGVVEVLEIRDTEEAKFVEIGVQRRSTDSPDSALTNAMVVNLEEHDLSSVHVYKKLLQGVQRRTDTIQSLNFQIELNEKRRDTFQLLRPKKELVEEVPFEPFVPLTDDEEHEVSCAFSSNRRKILVAHESSNIEVSGEKMRCLLPGAWLNDEVINLYLELLKERERREPKKFLKCHFFNTFFYKKLISGRDGYDYKSVRRWTSQRKLGYNLFDCDKIFVPIHQEIHWCLAVINKKDAKFQYLDSLKGKDNRVLQVLARYFVDEVKDKSGKDIDVSTWEKEFVEDLPEQENGFDCGVFMIKYADFYSRGLGLCFNQEHMPYFRRRTAKEVLRLRAD* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3879 470 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 167 468 - -
Mal4g3879 470 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 146 - -
Mal4g3879 470 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 167 468 - -
Mal4g3879 470 MobiDBLite consensus disorder prediction 21 47 - -
Mal4g3879 470 Pfam Ulp1 protease family, C-terminal catalytic domain 283 463 IPR003653 GO:0006508|GO:0008234
Mal4g3879 470 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 146 - -
Mal4g3879 470 Gene3D Adenoviral Proteinase; Chain A 237 468 - -
Mal4g3879 470 SUPERFAMILY Cysteine proteinases 236 468 IPR038765 -
Mal4g3879 470 ProSiteProfiles Ubiquitin-like protease family profile. 268 440 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3879 Mal-Chr4 112877014 112883087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3879 K08592 - gmx:100802161 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4845 5 121623507 121629215 Mal4g3879 4 112877014 112883087 PCT