Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4108 ATGGACCAACCGATCCACAATTTCCCGAAGCATGATTCCACCGGCGAAGACGAATCAGCGATTTCCGATTGCGAGAGCGTCGCATCCGGCGGCCACGATTCCAGAAGGATAATTCGGAAGACTACGGAGGGTGCGGATATCAACCTAATCCGAAGCAGATTCGTTTGTGGTTTAAGCACGCAAGGGTTGAAACCTTATGCAGTAGCGATTTTCAGGAATCCTTGTAAAACGGTAATGGCACAAGCGAGGATTCAATCGTTTGAGATCTTCGCACGTGCGGTGGCTAAATTGCGCGGTGGAAATGCTAATGTGAAACACGCTTGGTTTGGTGCTTCTAGTAGAGAAGAGATTGTTGATATTATTCAACACGGTTTTGGTCATGCTCATAGTAATGGTTTGCGTTTTTCTCCGAATGATTCTCCACTTGAAAGTGTGAAAAACACTGTTGTTGACAAAGATGGTTTTAGGCATTTGTTGTTGTGCCGTGTGATTATGGGAAGATTGGAGGTTGTGGCTTCGGGTTCTGATCAACGCCGTCCGAGTTCTGAAGAATATGATTCTGGGGTGGATAGTTTTTCATCGCCCAAAGAGTTTGTAGTTTGGAGTAACCGGATCAACACACATGTGTTGCCAGAATATGTTTTGAGTTTCAAACTTGCTTCCGACAAAGGACATGAGAAGGTTGAAGTTGGAGGGCAACATGTGAGACCGTCTTCGCCTTGGGTGCCATTCCCGGCTCTGATTTCCGCGCTTTCAAAGATTTTGCGTCAGTCTGATATTGTTTCTATTGGCAAGTTTCACAAGGAGTATAGGGAAAAGAAGATTTCGCGACATGAGATGATACGAAAAGTTAGACAAGTTGCAGGAGACAAATTGCTGTTTTCTGTCATCAAATCTTTCAGAGCAAAGAAAATGCCTGCAAGCTTTAAGCAAGCCGGAATGCCAGCAACGATGATGGGATGA 963 0.4496 MDQPIHNFPKHDSTGEDESAISDCESVASGGHDSRRIIRKTTEGADINLIRSRFVCGLSTQGLKPYAVAIFRNPCKTVMAQARIQSFEIFARAVAKLRGGNANVKHAWFGASSREEIVDIIQHGFGHAHSNGLRFSPNDSPLESVKNTVVDKDGFRHLLLCRVIMGRLEVVASGSDQRRPSSEEYDSGVDSFSSPKEFVVWSNRINTHVLPEYVLSFKLASDKGHEKVEVGGQHVRPSSPWVPFPALISALSKILRQSDIVSIGKFHKEYREKKISRHEMIRKVRQVAGDKLLFSVIKSFRAKKMPASFKQAGMPATMMG* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4108 320 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 11 310 IPR044964 -
Mal5g4108 320 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 11 310 - -
Mal5g4108 320 Pfam RCD1-SRO-TAF4 (RST) plant domain 236 301 IPR022003 -
Mal5g4108 320 Gene3D - 41 219 - -
Mal5g4108 320 ProSiteProfiles RST domain profile. 235 306 IPR022003 -
Mal5g4108 320 ProSiteProfiles PARP catalytic domain profile. 32 239 IPR012317 GO:0003950
Mal5g4108 320 SUPERFAMILY ADP-ribosylation 78 219 - -
Mal5g4108 320 MobiDBLite consensus disorder prediction 1 18 - -
Mal5g4108 320 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4108 Mal-Chr5 111461592 111465115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4108 - - gmx:100784311 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4108 5 111461592 111465115 Mal2g2380 2 29680672 29684220 PCT