Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2380 ATGGAATCAAATTCAACATTCCCTCAACAAGAAGAGGAATGGTATCATCATGATGTCAGCATTGAAGAAGAAGAAGAAGAAGAAGAACAACACTCCTCCGCCCTTTCCGATTGCGAAAGCGGTGTTTCCGCCACCACCACCGGCGAACAACGACAACGACGACAAACTTCCGATTCCTTTTTAATTAACCTAAGCGAAGGTGACTCTGTTCATGACCTAATTAAGACGAGGTTTCTTCGTGGCTTGGGTGCTTTTTCAAACCAAACTGAGATTCTTGCTATTCACAGAAACGCGTGTTCTGATGTCGTTTCACAGGCGAGGCTTCAATCCTTTCTTGTTTATGCAGAAGCTGTTTCGAAACTTCGCGGTGGTGATTCCAATGTGAAATATGCTTGGTATGGAACTTCTGGTGAGAATGATGTTAGAGGCATTCTTTCAAACGGTTTCAGTCATGTTCATGGGAGTAGCCTCTGCCTTTCTCCGGATGATTCTCCTCTCCAAAGTTTGAAAAACAGTGCTGTTAGGAGAGATGGTGTGGGGCATTTGATACTGTGCAGGGTTATTTTGGGGAGAACAGAGATTTTGCAAGCTGACACAAAACAATGTTATCCAAGTTGTGAGGATTATGATTCTGGGGTGGATAGTTTCTCAGCTCCGACCAAGTACATGATTTGGAGCAGTAGAATGAATACTCATGTTTGGCCTGCATATGTTATAAGCTTCAGGGTTTCTTCCTCTAAAGGGATTCAGATGAATGAAGAAGAACATGTTAGACCAACTTCACCTTGGATGCCTTTTCCAATTATGATTTCTTTGCTTTCCAAGTTTTTACCACAGCTTGATATTGCCCAGATTTCCAAGTTACACAAAGCTAGAAAGGAAAGGAAGATTTCAAGACATGAATTGATACAAAAAGTGAGACAAATTGCAGGAGACAAGTTGTTGTTTTCAGTCATCAAGTATTATAGAGCCAAGAAAAAACCTGCAAGTTTTCAGCAAGCAAGGTCAAAGAATGACAGCCAGACAGCTAGCAACGCAGATAGAAAGAGTTCCTTCATATGA 1062 0.4162 MESNSTFPQQEEEWYHHDVSIEEEEEEEEQHSSALSDCESGVSATTTGEQRQRRQTSDSFLINLSEGDSVHDLIKTRFLRGLGAFSNQTEILAIHRNACSDVVSQARLQSFLVYAEAVSKLRGGDSNVKYAWYGTSGENDVRGILSNGFSHVHGSSLCLSPDDSPLQSLKNSAVRRDGVGHLILCRVILGRTEILQADTKQCYPSCEDYDSGVDSFSAPTKYMIWSSRMNTHVWPAYVISFRVSSSKGIQMNEEEHVRPTSPWMPFPIMISLLSKFLPQLDIAQISKLHKARKERKISRHELIQKVRQIAGDKLLFSVIKYYRAKKKPASFQQARSKNDSQTASNADRKSSFI* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2380 353 Gene3D - 59 243 - -
Mal2g2380 353 MobiDBLite consensus disorder prediction 1 57 - -
Mal2g2380 353 MobiDBLite consensus disorder prediction 331 353 - -
Mal2g2380 353 Pfam RCD1-SRO-TAF4 (RST) plant domain 258 323 IPR022003 -
Mal2g2380 353 SUPERFAMILY ADP-ribosylation 61 253 - -
Mal2g2380 353 MobiDBLite consensus disorder prediction 330 353 - -
Mal2g2380 353 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 28 336 - -
Mal2g2380 353 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 28 336 IPR044964 -
Mal2g2380 353 MobiDBLite consensus disorder prediction 35 57 - -
Mal2g2380 353 MobiDBLite consensus disorder prediction 18 32 - -
Mal2g2380 353 ProSiteProfiles PARP catalytic domain profile. 47 263 IPR012317 GO:0003950
Mal2g2380 353 ProSiteProfiles RST domain profile. 257 328 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2380 Mal-Chr2 29680672 29684220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2380 - - pvu:PHAVU_009G178500g 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4108 5 111461592 111465115 Mal2g2380 2 29680672 29684220 PCT