Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g4064 ATGGATCCCAACCCAGGAACCTTCCCAATCCTCTCCTACGTCATGTCCCGTTTTCCATCCTTCAACATCAAACAACCACCCTCCGATCCCCAATCTCATTCCGACGTCGAACAACCACCACCCTCCGATCCATCCTCCTCAATCATCGGCCAAATGCCGAATCTCACAGACCCAAAACTCCTCGCTGCAATGACCCGCGCCATCTCCGACGTCTCCCAAGCCCGATCAGTCCTCAAACTCATCGGCGACCGCCCCACCCACGAAGAAGTCGATAACGCCAAGGCCAAACTCGTCGATCTCGAAGCGCATTTGTTACGTCAATTGGAAGGGATCGTCGCTCTTCCTAGACCTCCTGAGATTGATGAACAACAGTGGAAAGTTCATGTTACGGAAAGAGAAGCGAAATGTAGAGAAGGTGTTGAGAATGAGAAGCGTGTTTATAAAGCGCTTTTGCAAAGAGATGAGATGCATGAGGCTTACGAGAAGCTTCTTAAGGATGCGGAGATAAGGCTTGTGAAGATTTATGAGGATGATGGTGGAGATGGTAATGATGGTGATGTGGTTGAGGATGTGGAATGTGAAGAACGTGTTAAGAGGATATTGCAGGAGGCGCGTGAGAAAGATGTTGACCGTGTGGATCTTTCCGGGCAACGGTTGAGGAGGTTGCCGGAGGCGTTTTGTCATGTTTCTTCCTTGGTTCTGCTCAATCTTTCCACCAACAAGCTTTCGGTGATTCCTGACACAATAGCTGGATTGCACAATCTTGAGGAGCTTAATATCTCTTCAAATATTTTGGAGTCACTTCCGGATTCAATTGGCTTGTTACAAAAGTTGAAAATCCTCAATGTCTCTGGAAATAAGTTGAGTGCTCTTCCTGATTCCATCAGTCAGTGCAGATCATTGGTGGAGCTGGATGCAAACTTTAACAGTCTATCATATTTGCCAACAAACATTGGATATGAATTACAGAATTTACAGAAGCTCTTGATTGGTTTAAACAAGATACGATCCCTTCCCTCATCTATTTGCGAGATGAAGTCACTGCGCTATCTAGATGCTCACTTTAATGAACTACATGGGCTTCCTATTGCAATTGGGAGATTGACTAGTCTTGAATTTCTCAACCTGAGTAGTAACTTCAGTGACCTTCAAGAAATACCAGAGACGTTTGGTGATCTGAGTAGCCTCAAGGAATTGGATCTTAGCAACAATCAAATTCATGCACTTCCTGATACATTTGGCCGCCTTGATAGTTTAATCAAGCTAAACTTGGAGCAGAACCCTATTGAATTGCCACCTATGGAGATTGTAAATGAAGGTGTCCAAGCCATCAAGTCTTACATGGCCAAGAGGTGGATCGATATATTGGCAGAGGAAGAGAGGAAAAACACACATGAATTTCAAGAACAAGGACAGAGTGGTTGGTTAACACGAAGTACCTCCTGGTTGAAGAACGTTTCTGGAAATGTAACTGAGTATATCGGAAGTGCCGTGTCTCCCAGAACTCCCAAAAGTCCCAGAGATAATTTTCTTGATCAGCCACTATGA 1548 0.449 MDPNPGTFPILSYVMSRFPSFNIKQPPSDPQSHSDVEQPPPSDPSSSIIGQMPNLTDPKLLAAMTRAISDVSQARSVLKLIGDRPTHEEVDNAKAKLVDLEAHLLRQLEGIVALPRPPEIDEQQWKVHVTEREAKCREGVENEKRVYKALLQRDEMHEAYEKLLKDAEIRLVKIYEDDGGDGNDGDVVEDVECEERVKRILQEAREKDVDRVDLSGQRLRRLPEAFCHVSSLVLLNLSTNKLSVIPDTIAGLHNLEELNISSNILESLPDSIGLLQKLKILNVSGNKLSALPDSISQCRSLVELDANFNSLSYLPTNIGYELQNLQKLLIGLNKIRSLPSSICEMKSLRYLDAHFNELHGLPIAIGRLTSLEFLNLSSNFSDLQEIPETFGDLSSLKELDLSNNQIHALPDTFGRLDSLIKLNLEQNPIELPPMEIVNEGVQAIKSYMAKRWIDILAEEERKNTHEFQEQGQSGWLTRSTSWLKNVSGNVTEYIGSAVSPRTPKSPRDNFLDQPL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g4064 515 SUPERFAMILY L domain-like 208 429 - -
Mal5g4064 515 ProSiteProfiles Leucine-rich repeat profile. 254 275 IPR001611 GO:0005515
Mal5g4064 515 PANTHER LEUCINE-RICH REPEAT-CONTAINING 3 498 - -
Mal5g4064 515 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 3 498 - -
Mal5g4064 515 MobiDBLite consensus disorder prediction 21 53 - -
Mal5g4064 515 ProSiteProfiles Leucine-rich repeat profile. 395 416 IPR001611 GO:0005515
Mal5g4064 515 Gene3D Ribonuclease Inhibitor 121 318 IPR032675 -
Mal5g4064 515 Gene3D Ribonuclease Inhibitor 320 450 IPR032675 -
Mal5g4064 515 SMART LRR_bac_2 345 364 - -
Mal5g4064 515 SMART LRR_bac_2 229 248 - -
Mal5g4064 515 SMART LRR_bac_2 252 271 - -
Mal5g4064 515 SMART LRR_bac_2 393 412 - -
Mal5g4064 515 SMART LRR_bac_2 322 341 - -
Mal5g4064 515 SMART LRR_bac_2 298 317 - -
Mal5g4064 515 SMART LRR_bac_2 368 389 - -
Mal5g4064 515 SMART LRR_bac_2 275 294 - -
Mal5g4064 515 SMART LRR_typ_2 322 345 IPR003591 -
Mal5g4064 515 SMART LRR_typ_2 229 251 IPR003591 -
Mal5g4064 515 SMART LRR_typ_2 275 298 IPR003591 -
Mal5g4064 515 SMART LRR_typ_2 368 392 IPR003591 -
Mal5g4064 515 SMART LRR_typ_2 299 321 IPR003591 -
Mal5g4064 515 SMART LRR_typ_2 393 416 IPR003591 -
Mal5g4064 515 SMART LRR_typ_2 252 274 IPR003591 -
Mal5g4064 515 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515
Mal5g4064 515 Pfam Leucine rich repeat 254 311 IPR001611 GO:0005515
Mal5g4064 515 Pfam Leucine rich repeat 387 429 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g4064 Mal-Chr5 110882676 110886811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g4064 238 434 Receptor kinase-like Gene Family AT5G56040 33.043 7.69e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g4064 - - gmx:100782818 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4064 5 110882676 110886811 Mal5g4064 5 110882676 110886811 ECH
Mal5g4064 5 110882676 110886811 Mal2g2425 2 30422749 30425672 PCT