Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2425 ATGGATCCAAATCCAGGAACCTTCCCGATCCTCTCCTACGTCATGTCCCGCCTCCCATCCTTATCCACCAAACTCACCGCCACAACCCCCGACACCGAATTATACGACATCGAACAACCACGCATCGTCGACCAAATGCCAAACCTAGCAGATCCCGAATTAATCGCTGCCATGGCCCGGGCCATCGACGACGTTCAACAGGCCCGGGCCATTCTCAAACTAATCGGCGAACGGCCCACTCATGAAGAAGTGGACCACGCGAAAGCCAAACTAACGGATGTAGAAACCGAGCTTTCGCGACAGCTGGAAGGAATTGTGACGTTGTCGAGGCCGTCGGAGATTGAGATCCATGGATGGAGAGAACATCAGGCGGAGAAGGAGAAGCAGTGTAGGGAGGAAGCGGAGAAAGAGAAGCGCATTTGGAAATCGCTTATTCAGCTTGATGAGATGCATGAGGAATATGAGAAGCTTTTGAAGGAGGCTGAGAAGAAATTGGTTAGAATGTATGATTCTGCTGGTGATGGTGAGGTGGATGAAGAGGTTGTGGGGATTTTGAAGGAAGCGGATGGGAAAGGAATGGAACGGATTGAGATTTCGAATCGGAATTTGAAGGTGTTGCCGGAAGCTTTTGGGAGGATTCCTGGTTTGCTTGTGCTTGACGTCTCTGCTAATCTGCTTCCGGCAATTCCCGACTCAATAGCTGGATTGCAAAATCTGGAGGAGCTTAATCTCTCTGCAAATCATTTGGAATCACTGCCCGATTCAATTGGATTACTACAAAAGTTGAAATTGCTCAATGTTTCTGGAAACAAGCTTCCTGCCCTTCCTGATACCATTTGTCAGTGCAGGTCATTGGTGGAGCTGGATGTAAGCTTTAACGATCTGTCGTACTTGCCAACAAACATTGGGTATGAATTACCAAACTTGAAGAAACTCATGATTCAGTTGAACAAAATCCGATCTCTTCCCTCATCCATTTGTGAGCTGAAGTCGTTGTGCTATTTGGATGCTCACGTCAATGAGCTACATGGGCTTCCAGTAGCATTTGGGAGACTGACTACTCTGGAAGTTCTCAACTTGAGCAGTAACTTCACTGATCTTAGAGAACTTCCAGAGACATTTGGCGAATTGACTAATCTCAAGGAACTGGATCTCAGCAATAATCAGATTCGTGCACTTCCCGATACATTTGGTTGCCTTGATAATTTGACCAAGCTCAACTTGGATCAGAATCCTCTTGAACTGCCACCAGTGGAGATTGTAAACCAAGGGGTCCAAGCCATAAAGACTTTTATGGCCAAGAGGTGGATTGATATGTTGGAAGAGGAAGAAATAAAAAGCAATCAAGAAATGCAAGAACAAGTAGAGGGTGGCTGGTTAACAAGAAGCACATCCTGGTTGAAGAATGTTTCTGGAAATGTAGCTGGGTATATTGGAACTGCCGTTGGATCTCCTATGTCACCCAAATCTCCCACACAAGCTTATCTTAATCAGCAGCTTTGA 1503 0.4617 MDPNPGTFPILSYVMSRLPSLSTKLTATTPDTELYDIEQPRIVDQMPNLADPELIAAMARAIDDVQQARAILKLIGERPTHEEVDHAKAKLTDVETELSRQLEGIVTLSRPSEIEIHGWREHQAEKEKQCREEAEKEKRIWKSLIQLDEMHEEYEKLLKEAEKKLVRMYDSAGDGEVDEEVVGILKEADGKGMERIEISNRNLKVLPEAFGRIPGLLVLDVSANLLPAIPDSIAGLQNLEELNLSANHLESLPDSIGLLQKLKLLNVSGNKLPALPDTICQCRSLVELDVSFNDLSYLPTNIGYELPNLKKLMIQLNKIRSLPSSICELKSLCYLDAHVNELHGLPVAFGRLTTLEVLNLSSNFTDLRELPETFGELTNLKELDLSNNQIRALPDTFGCLDNLTKLNLDQNPLELPPVEIVNQGVQAIKTFMAKRWIDMLEEEEIKSNQEMQEQVEGGWLTRSTSWLKNVSGNVAGYIGTAVGSPMSPKSPTQAYLNQQL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2425 500 Gene3D Ribonuclease Inhibitor 301 460 IPR032675 -
Mal2g2425 500 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 3 34 481 - -
Mal2g2425 500 SMART LRR_typ_2 213 235 IPR003591 -
Mal2g2425 500 SMART LRR_typ_2 283 305 IPR003591 -
Mal2g2425 500 SMART LRR_typ_2 352 376 IPR003591 -
Mal2g2425 500 SMART LRR_typ_2 400 423 IPR003591 -
Mal2g2425 500 SMART LRR_typ_2 377 399 IPR003591 -
Mal2g2425 500 SMART LRR_typ_2 259 282 IPR003591 -
Mal2g2425 500 SMART LRR_typ_2 306 329 IPR003591 -
Mal2g2425 500 SMART LRR_typ_2 236 258 IPR003591 -
Mal2g2425 500 Pfam Leucine rich repeat 307 363 IPR001611 GO:0005515
Mal2g2425 500 Pfam Leucine rich repeat 238 295 IPR001611 GO:0005515
Mal2g2425 500 Pfam Leucine rich repeat 371 413 IPR001611 GO:0005515
Mal2g2425 500 ProSiteProfiles Leucine-rich repeat profile. 238 259 IPR001611 GO:0005515
Mal2g2425 500 ProSiteProfiles Leucine-rich repeat profile. 379 400 IPR001611 GO:0005515
Mal2g2425 500 SUPERFAMILY L domain-like 194 417 - -
Mal2g2425 500 Coils Coil 144 171 - -
Mal2g2425 500 Gene3D Ribonuclease Inhibitor 115 297 IPR032675 -
Mal2g2425 500 PRINTS Leucine-rich repeat signature 377 390 - -
Mal2g2425 500 PRINTS Leucine-rich repeat signature 239 252 - -
Mal2g2425 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING 34 481 - -
Mal2g2425 500 SMART LRR_bac_2 352 373 - -
Mal2g2425 500 SMART LRR_bac_2 236 255 - -
Mal2g2425 500 SMART LRR_bac_2 329 348 - -
Mal2g2425 500 SMART LRR_bac_2 377 396 - -
Mal2g2425 500 SMART LRR_bac_2 259 278 - -
Mal2g2425 500 SMART LRR_bac_2 282 301 - -
Mal2g2425 500 SMART LRR_bac_2 306 325 - -
Mal2g2425 500 SMART LRR_bac_2 213 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2425 Mal-Chr2 30422749 30425672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2425 206 422 Receptor kinase-like Gene Family AT4G26540 29.032 3.47e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2425 - - gmx:100803823 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2425 2 30422749 30425672 Mal2g2425 2 30422749 30425672 ECH
Mal5g4064 5 110882676 110886811 Mal2g2425 2 30422749 30425672 PCT