Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2587 ATGGTGAAGGGTCCTGGTCTTTACTCCGATATCGGCAAGAGAGCTCGAGATCTTCTTTTCAAAGATTATCAGAATGATCACAAGTTCACAATCTCCACTCAAACTTCTACTGGAGTGGAAATCACTTCAAGTGGAGTCAGGAAAGGTGAGCTGTTTTTGTCTGATGTGAGTACTAAGTTGAAGCACAAGAACATCACCACTGATGTCAAAGTTGACACTAACTCGAATCTGCTCACAACCATTACTGTGGATGAAACGGTGCCTGGACTCAAGACAATTTTTAGCTTCATTTTTCCAGATCAGAAATCTGGCAAGGTGGAACTACAGTACCTTCATGATTATGCTGGGATCAGCACAAGTATTGGGTTGACAGCAACTCCCACTGTTAACATCTCTGGTGTGCTTGGAAATAATTTGGTTTCTGTTGGATCAGATGTTTCCTTTGATACAGAAACTGGCTTCTTGAACAAGTACAATTTTGGGTTGAATGTTACTCATGCTGACCTTATTGCTTCTCTGGCTCTCAATGATAGATGTGACACCCTCAATGCCTCGTATTACCATGTTGTGAGCCCACTGACAAACACTGCTGTTGGGGCGGAGCTTTCACATACCTTTTCCAGCAACGAGAACACACTCACCATCGGCACACAACATGCTCTTGACCCTGTAACCTTGTTGAAAGCTAAGGTTAACAATTATGGTAGGGCAAGTGCTGCAATCCAGCATGACTGGAGTCCAAAAGCACGTTTCTCTCTTGTTGGGGAAGTTGATACTGCTGCCATTCAAAAGACTGCAAAGGTTGGTCTTGCTTGTGTCTTGAAGCCTTAG 831 0.4356 MVKGPGLYSDIGKRARDLLFKDYQNDHKFTISTQTSTGVEITSSGVRKGELFLSDVSTKLKHKNITTDVKVDTNSNLLTTITVDETVPGLKTIFSFIFPDQKSGKVELQYLHDYAGISTSIGLTATPTVNISGVLGNNLVSVGSDVSFDTETGFLNKYNFGLNVTHADLIASLALNDRCDTLNASYYHVVSPLTNTAVGAELSHTFSSNENTLTIGTQHALDPVTLLKAKVNNYGRASAAIQHDWSPKARFSLVGEVDTAAIQKTAKVGLACVLKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2587 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Mal5g2587 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mal5g2587 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mal5g2587 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mal5g2587 276 Gene3D Porin 1 275 IPR023614 -
Mal5g2587 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2587 Mal-Chr5 75683796 75686122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2587 K15040 - gmx:100787662 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g2587 5 75683796 75686122 Mal5g2587 5 75683796 75686122 ECH
Mal5g2587 5 75683796 75686122 Mal5g4212 5 112952932 112954672 ECH
Mal5g2587 5 75683796 75686122 Mal3g0110 3 4116714 4120204 ECH
Mal5g2587 5 75683796 75686122 Mal6g3795 6 110630266 110634765 ECH