Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0110 ATGGCTGCTAAGGGTCCTGGTCTCTACTCTGACATCGGCAAGAAAGCCAGAGATCTGTTGTTCAAGGACTATAACAGTGACCAGAAGTTTACCATCACTACCTACTCACCCACTGGAGTTGCTATAACATCATCGGGTACAAAGAAAGGTGAAGTGTTTGTGGGTGATGTTTTTACCCAGTTGAAGAACAAAAACTACACTGCTGATATCAAAGTAGACACAGAGTCTAATCTTTTCACAACTATCACTGTCAATGAACCTGCTCCTGGTGTGAAGGCTATTATAAGCTGCAAAGTTCCTAATTCAGCTTCTGGGAAGGTGGAACTACAATACTTGCACGACTATGCTGGATTAAGCGGCAACATTGGGTTGAAAACTAACCCAATTGTCAACTTATCTGGTGTTTTTGGAACTAAGGCTCTTGCTGTTGGTGGTGATATTTCTTATGATACCAAACTTGGGCAGCTAACAAAATCTAATATTGGAGTGAGCTTTGTCAAAGACGACTTGCTTGGAGCATTGACTCTGAATGAGAAAGGTGATGCGCTGAATGCTTCATACTATCATGTGATTAACCCCTTGACCAACACTGCTGTTGGTGTTGACATTGGTCACAAATTCTCAACTAAAGAGAACAACTTCACACTTGGTGCCCAACATGCATTGGATTCATTGACCACATTGAAGGGTCGCGTCACCAACGCGGGCAAGGCGAGTGCCCTTATCCAGCACGAGTGGCGTCCCAAATCACTCATCACCATTTCTACTGAGCTAGATACCAAGGCCATTGAGAAGAGTGCTAAGATTGGATTGAGTTTGGCTCTCAAACCTTGA 834 0.4365 MAAKGPGLYSDIGKKARDLLFKDYNSDQKFTITTYSPTGVAITSSGTKKGEVFVGDVFTQLKNKNYTADIKVDTESNLFTTITVNEPAPGVKAIISCKVPNSASGKVELQYLHDYAGLSGNIGLKTNPIVNLSGVFGTKALAVGGDISYDTKLGQLTKSNIGVSFVKDDLLGALTLNEKGDALNASYYHVINPLTNTAVGVDIGHKFSTKENNFTLGAQHALDSLTTLKGRVTNAGKASALIQHEWRPKSLITISTELDTKAIEKSAKIGLSLALKP* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0110 277 Gene3D Porin 1 276 IPR023614 -
Mal3g0110 277 Pfam Eukaryotic porin 5 270 IPR027246 GO:0005741|GO:0055085
Mal3g0110 277 ProSitePatterns Eukaryotic mitochondrial porin signature. 220 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mal3g0110 277 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 3 277 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mal3g0110 277 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 3 277 - -
Mal3g0110 277 CDD Porin3_VDAC 6 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0110 Mal-Chr3 4116714 4120204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0110 K15040 - gmx:100777928 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0110 3 4116714 4120204 Mal5g4212 5 112952932 112954672 ECH
Mal3g0110 3 4116714 4120204 Mal3g0110 3 4116714 4120204 ECH
Mal3g0110 3 4116714 4120204 Mal6g3795 6 110630266 110634765 ECH
Mal5g2587 5 75683796 75686122 Mal3g0110 3 4116714 4120204 ECH