Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2449 ATGGCATCACAAAACCCACCTCAGCCTCATTTCCATGATCACCTTCCTTTCATGGCCAACAAGCTAGGTGGAGATGGCTTGATAGATGAACTTTGTAATGGGTTCAATCTTTTGAAGGATTCTGATAAAGAGGTCATCACTTTTGAAAGCCTTAAGAGGAATTCAGCTTTGTTGGGATTAAATGGTTTTAGTGATGAAGATCTTTTGTCTATGCTAATGGAAGGTGATTTTGATGGAGATGGTGCTCTTAACCAGATGGAGTTCTGTGTCTTGATGTTTAGACTGAGCCCTGAACTTATGGAGGGCTCTAAGTTATGGTTGGAACAGGTCCTTCAACAATAA 342 0.4064 MASQNPPQPHFHDHLPFMANKLGGDGLIDELCNGFNLLKDSDKEVITFESLKRNSALLGLNGFSDEDLLSMLMEGDFDGDGALNQMEFCVLMFRLSPELMEGSKLWLEQVLQQ* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2449 113 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Mal5g2449 113 PANTHER CALCIUM-BINDING PROTEIN KIC 7 113 IPR044205 GO:0005509
Mal5g2449 113 SUPERFAMILY EF-hand 27 101 IPR011992 -
Mal5g2449 113 Pfam EF-hand domain pair 43 94 IPR002048 GO:0005509
Mal5g2449 113 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Mal5g2449 113 PANTHER CALCIUM-BINDING PROTEIN KRP1 7 113 - -
Mal5g2449 113 Gene3D - 9 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2449 Mal-Chr5 67549100 67549441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2449 3 113 EF-hand Containing Proteins AT4G27280 64.286 1.27e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g2449 K24345 - gmx:100527035 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1003 4 13726831 13727187 Mal5g2449 5 67549100 67549441 PCT