Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1003 ATGGCTGCACAAAACACTCAAGTTCAATTTCAAGACTCATTACCCTTAATGGCAAACAAGCTTGGTGGGGATGGATTAATTGATGAGCTATGCAATGGTTTCAATCTTTTGATGGATTCTACTAAAGGAGTCATTACTTTTGAAAGCCTTAAAAAGAATTCAGCTTTGCTTGGATTACAAGATTTAACCGATGTGGAACTTCAATCAATGATTATGGAAGGTGATTTTGATGGTGATGGTGCTCTTAATCAAATGGAGTTTTGTGTTTTGATGTTTAGACTTAGTCCTGAACTCATGGATGGGTCTAAGTTATGGTTGGAACAAATGCTTCAACAAGAAGTCCAAGATTGTTTCTAA 357 0.3613 MAAQNTQVQFQDSLPLMANKLGGDGLIDELCNGFNLLMDSTKGVITFESLKKNSALLGLQDLTDVELQSMIMEGDFDGDGALNQMEFCVLMFRLSPELMDGSKLWLEQMLQQEVQDCF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1003 118 PANTHER CALCIUM-BINDING PROTEIN KRP1 1 116 - -
Mal4g1003 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Mal4g1003 118 SUPERFAMILY EF-hand 5 91 IPR011992 -
Mal4g1003 118 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Mal4g1003 118 PANTHER CALCIUM-BINDING PROTEIN KIC 1 116 IPR044205 GO:0005509
Mal4g1003 118 SMART efh_1 66 94 IPR002048 GO:0005509
Mal4g1003 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Mal4g1003 118 Gene3D - 7 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1003 Mal-Chr4 13726831 13727187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1003 4 113 EF-hand Containing Proteins AT4G27280 64.865 2.67e-47 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1003 K24345 - gmx:100500465 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1003 4 13726831 13727187 Mal4g1003 4 13726831 13727187 ECH
Mal4g1003 4 13726831 13727187 Mal5g2449 5 67549100 67549441 PCT