Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1428 ATGGGATCAATTGCAGAAAGGATTGCAGTGGTGACTGGAGCAAACAAAGGAATTGGATTTGAGATAGTTAAGCAGTTAGCTTCAGCTGGAATCAAAGTGGTGCTTACAGCAAGAGATGAGAAAAGGGGTCTTCAAGCATTGGAAACACTTAAAGCCTCTGGTTTATCTGATTTTGTTGTGTTTCATCAAGTAGATGTGGCTAATGCTGCAAGTGTAGCTACTCTTGCAGATTTTGTCAAATCCCAATTTGGCAAACTTGATATTCTGGTTAACAATGCAGGGATTAGTGGAACTGTAATTAATGACAAAGATTTAGCTACTTTGCTGATCTCTAACCCTGGAGCATTAACAGAAGATGAAAAGAATAAGGCAGTGACTCAAACATATGAGTTAGCTGAAGAATGCTTGAAAATAAATTATTATGGTACTAAAATAACAACTGAATCACTTCTGCCACTCCTAAAGTTATCTGATTCACCAAGAGTCGTCAATGTATCATCCACTCTGGGAAAGTTAGAGAGCATACAAAATGAATGGACCAAAAAAGTTTTCAGTGATGCTGATAACTTAACTGAAGAGAAAGTGGATGAAGTATTGAAGAAATTTCTTGAAGATTTCAAAGAAGGTTCATTGGAAAGGAAAGGCTGGCCTAAAACTGGTGGTGCATATGTCTTGTCAAAAGCTTCTATGAATGCTTACACAAGAATTGTTGCTAAGAAATTTCCTACTTTAAGCATCAATAGTATTTGCCCTGGTTATGTCATCACAGATATAACTGGCAATACTGGTCTCTTAACTGCTGAAGAAGGTGCTGCTAGTGTTGTTAAGCTTGCACTACTTCCGAATGGAAGTCCGTCTGGCCAATTCTATAACCGGACCGAAGTCTCTTCCTTTTGA 897 0.3813 MGSIAERIAVVTGANKGIGFEIVKQLASAGIKVVLTARDEKRGLQALETLKASGLSDFVVFHQVDVANAASVATLADFVKSQFGKLDILVNNAGISGTVINDKDLATLLISNPGALTEDEKNKAVTQTYELAEECLKINYYGTKITTESLLPLLKLSDSPRVVNVSSTLGKLESIQNEWTKKVFSDADNLTEEKVDEVLKKFLEDFKEGSLERKGWPKTGGAYVLSKASMNAYTRIVAKKFPTLSINSICPGYVITDITGNTGLLTAEEGAASVVKLALLPNGSPSGQFYNRTEVSSF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1428 298 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mal5g1428 298 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Mal5g1428 298 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mal5g1428 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Mal5g1428 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Mal5g1428 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mal5g1428 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Mal5g1428 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Mal5g1428 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 298 - -
Mal5g1428 298 Pfam short chain dehydrogenase 8 175 IPR002347 -
Mal5g1428 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 288 IPR036291 -
Mal5g1428 298 Gene3D - 2 298 - -
Mal5g1428 298 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 298 - -
Mal5g1428 298 CDD carb_red_PTCR-like_SDR_c 7 298 IPR045313 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1428 Mal-Chr5 26454747 26457109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1428 4 268 Acyl Lipid Metabolism Gene Families AT1G63380 27.076 1.22e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1428 K15095 - gmx:102663482 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1428 5 26454747 26457109 Mal5g1428 5 26454747 26457109 ECH
Mal3g2659 3 99660493 99663759 Mal5g1428 5 26454747 26457109 PCT