Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2659 ATGGATTTATTTGCCGAATTGTCATTGAGGTTTGCTGTTGTGACTGGAGCAAATAAGGGAATTGGTTATGGGATATGTAAGAAATTGGCTTCAAGTGGAGTTGTGGTTGTGTTAACAGCTAGAAATGAAGAGAGGGGATTAGAAGCTGTAGACAGGCTCAAAAAAGAGTTGAGTTCCTATGATATTGTGGTTTTTCATCAACTTGATGTGGATGACCCTGCTAGTGTTGCAACCTTGGCTTCTTTCATTAAAACCATGTTTGGGAAACTTGATATCTTGGTGAATAATGCAGGTGTTCCTGGGGGCAAATTAATAGATGGTGATGCTCTACTTAGAAAGAGAAATGGAGCAGAAATTGATATCAAGAAAATAGGGTGTGAAACCTATGAGTTAGCTGAAAAATGTTTGAAAACAAACTTCTATGGAGTAGAAAGAGTAACTGAAGCTCTTGTTCCCCTTCTCCAACTATCCTCTTCTCCAACAATTGTCAACATTTCCTCCAGACAAGGACTATTGAAAAATATATCAAATGAGTGGGCTAGAAAAGTGTTTAGTGACATTGACAACCTAAGAAAGGAAAAAATAGATGAGGTGCTTAAAGAGTTTGAGAAAGATTACAAAGAAGGATCACTAGAGATCAAAGGTTGGCCAACTTTTGCTTCTGCTTATACAATGTCAAAAGCAGCTTTAAATGCTTACACAAGGATAATGGCCAAGAAATACCCTCATTTTCATATAAACTCTGTTTGTCCTGGATTTGTCAAGACTGATATTAATCACAATACAGGAAACTTAAGCATTGACGAAGGTGTTGAAACTCCTGTAATGTTGGCACTTTTGCCAAATTATTGTGTTTCTGGATGTTTCTTTACTAAGGGTGAAGTAATACCCTTTTGA 897 0.3701 MDLFAELSLRFAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVDRLKKELSSYDIVVFHQLDVDDPASVATLASFIKTMFGKLDILVNNAGVPGGKLIDGDALLRKRNGAEIDIKKIGCETYELAEKCLKTNFYGVERVTEALVPLLQLSSSPTIVNISSRQGLLKNISNEWARKVFSDIDNLRKEKIDEVLKEFEKDYKEGSLEIKGWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVCPGFVKTDINHNTGNLSIDEGVETPVMLALLPNYCVSGCFFTKGEVIPF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2659 298 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Mal3g2659 298 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Mal3g2659 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Mal3g2659 298 PRINTS Glucose/ribitol dehydrogenase family signature 11 28 IPR002347 -
Mal3g2659 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Mal3g2659 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 289 IPR036291 -
Mal3g2659 298 CDD carb_red_PTCR-like_SDR_c 10 298 IPR045313 GO:0016616
Mal3g2659 298 Pfam Enoyl-(Acyl carrier protein) reductase 214 263 - -
Mal3g2659 298 Gene3D - 5 298 - -
Mal3g2659 298 Pfam short chain dehydrogenase 11 174 IPR002347 -
Mal3g2659 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Mal3g2659 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Mal3g2659 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Mal3g2659 298 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 210 238 IPR020904 GO:0016491
Mal3g2659 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 8 298 - -
Mal3g2659 298 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 8 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2659 Mal-Chr3 99660493 99663759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2659 1 260 Acyl Lipid Metabolism Gene Families AT1G62610 23.881 3.96e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2659 K15095 - gmx:100789626 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2659 3 99660493 99663759 Mal3g2659 3 99660493 99663759 ECH
Mal3g2659 3 99660493 99663759 Mal5g1428 5 26454747 26457109 PCT
Mal5g1431 5 26584910 26591685 Mal3g2659 3 99660493 99663759 PCT