Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1364 ATGGACAATTCATCAAATTTTGATTCAACTTCTTCTGTGGATCAAAATGATCATTCAATCACTGAAACTCCTGAGTACTCACCATTCAGTGGTGATTCTTTCGCGTATTGCCGGAGTAATTCTGAAGTATCAAATTTGTCTGAGGCTATTGATGATAATAGCTATGCTAGTGACCCTTCACCTTCACCATGGATGAATGTGAAACATGGAGCTTCTCTTTCAAGGTTAGGAATGAAGCAGAGAAAGCATTCATTGGGTGATAAATCTGATGATCTTGATCTCTTGGAGTCAGAGCTTGAAATGATGAAGGAAAGATTTTCAAAGCTTCTTTTGGGGGAAGATATGTCTGGTGGTGGCAAAGGTGTTTGCACTGCAGTTACAATATCAAATTCCATTACCAATCTCTATGCAACTGTATTTGGACAAAATTTGAAGTTGGAGCCTCTAAAGCCTGAGAAGAAAGCTATGTGGAAAAGAGAAATGAATTGTCTTCTGTCTGTGTGTGATTACATAGTAGAATTTGCACCAACTGCACAATATTTGGATGATGGTACAATTGTAGAGATGATGACAAGTAGACCAAGGGCTGATATTTATATAAACCTTCCAGCTCTACAGAAGCTTGACACAATGCTCATAGAAATCTTTGATAGTTTCCAGGATACTGAATTTTGGTATGCAGAACAAGGGAGCATATCAGGGAATTCAAACCGCAGTTCACATTCGAATGGAACTTCACATTCGAAGGCAGGCTCATTTCGAATTATTGCTCAAAGAAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCACACTGGTGGCCTCTCTGATAAGTCAAGGAAGCATTTGATTGAGAAAAGAGATTGTGCTAATCAAATTCATAAAGCAGCTATGGCAATAAATAGCAGTATTCTTGCTGAGATGGAAATTCCAGAAACATACATGGTGAATCTTCCCAAGAGTGGAAGATCAAGTCTAGGGGATACAATTTATCGCTATATGCATTCCGGAGACAAGTTTTCACCCGGCAACCTTCTTGACTGTCTCAAAATAAGAACTGAACATGAAGCACTTGAACTAGCAGATAGAGTTGAATCTTCAATGTATACATGGAGACGTAAATCTTGCTTAAGCCATTCAAAATCATCATGGAACAAAGTAAAGGAGCTTATGGCTGAAACTGAACAAAGTGATAAGAACTATCTCTTAGCTGAGAGAGCTGAGACTTTATTGTTTTTCTTGAAACAAAGATATCCTGAACTTTCACAAACCTCCTTGGACACATGCAAGATTCAATACAACCAGGATGTAGGGAAAGCAGTACTGGAAAGCTACTCAAGAGTATTAGAAGGCTTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCTTTGTGCAGATAAATCTATGAGGAACTAA 1422 0.384 MDNSSNFDSTSSVDQNDHSITETPEYSPFSGDSFAYCRSNSEVSNLSEAIDDNSYASDPSPSPWMNVKHGASLSRLGMKQRKHSLGDKSDDLDLLESELEMMKERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLDDGTIVEMMTSRPRADIYINLPALQKLDTMLIEIFDSFQDTEFWYAEQGSISGNSNRSSHSNGTSHSKAGSFRIIAQRKDEKWWLPVPCVHTGGLSDKSRKHLIEKRDCANQIHKAAMAINSSILAEMEIPETYMVNLPKSGRSSLGDTIYRYMHSGDKFSPGNLLDCLKIRTEHEALELADRVESSMYTWRRKSCLSHSKSSWNKVKELMAETEQSDKNYLLAERAETLLFFLKQRYPELSQTSLDTCKIQYNQDVGKAVLESYSRVLEGLAFNIVAWIEDVLCADKSMRN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1364 473 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 320 - -
Mal5g1364 473 Coils Coil 85 105 - -
Mal5g1364 473 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 321 473 - -
Mal5g1364 473 MobiDBLite consensus disorder prediction 1 31 - -
Mal5g1364 473 Gene3D PRONE domain, subdomain 1 343 473 - -
Mal5g1364 473 Gene3D PRONE domain, subdomain 1 92 338 - -
Mal5g1364 473 ProSiteProfiles PRONE domain profile. 89 473 IPR005512 GO:0005085
Mal5g1364 473 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 321 473 IPR038937 GO:0005085
Mal5g1364 473 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 320 IPR038937 GO:0005085
Mal5g1364 473 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 97 472 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1364 Mal-Chr5 24430947 24434465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1364 - - gmx:100785956 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1364 5 24430947 24434465 Mal5g1364 5 24430947 24434465 ECH
Mal3g2701 3 100297261 100300026 Mal5g1364 5 24430947 24434465 PCT