Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2701 ATGGATAAATCATTCAAGTTTGGTGAAAATTGTGATGTGGAGTATCATCCTTCACCTTCTATGGATCATCATTCAGTCAGTGACACTCCTGCTTTTTCTAGATTGAGTGGTGATTCTTTCGGATACTGCCGAGTTTGGACAAGCTCAGAGGCATCAAATTCAAACTTCTCGGATTCTGTAGATGATAGCAGCTATGCCAGTGAGTCTTCGCCTTTGCCTTCGCCTTCACCTTCTCGGTGGAGAGAGGTTAAACCTGGTCTTTCTAGGCTAGGAATGAAGCTGCGCAAGCATTCGGTCGATAATAAACTTGATGACATTGATCTCTTGGATTCAGATGAGCTTGAAATGATGAAGGAAAGATTCGCGAAGCTTCTGCTAGGAGAAGACATGTCTGGTGGAGGGAAAGGTGTTAGCACAGCAGTTACAATCTCAAATGCCATTACCAATCTCTATGCAACAGTATTTGGACAAAGTTTAAAGTTGGAGCCACTGAAGCCTGAGAAGAAGGCCATGTGGAAAAGGGAAATTAAGGTTCTTTTATCTGTGTGTGATTACATACAAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGAACAATTGTGGAGATGATGAAAAGCAGGCCAAGGTCAGATATCTATATCAACCTCCCTGCACTGCAGAAGCTTGACACAATGCTTATAGAAATATTAGAATCCTTTGAGGATACTGAATTCTGGTATGCAGAGAACATATCAGCAAGTTCACCTCGTTTACGCGCAGCCTCGTTTCGAAAGATTGCTCCAAGGAAAGATGAGAAATGGTGGTTACCAGTTCCTTGTGTTCTCCCTGGTGGCCTCTCTGAGAAGTCAAGGAAACACCTTACAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCAGCAATGGCAATAAATAGCAATATTCTTGCAGACATAGATATTCCAGAAACATATATAGATGATCTCCCACAGAGTGGAAGAGGAAACCTAGGCGACACAATTTACCACTATATGTATACTGCGGACAAGTTCTCACCCGAACGCCTTCTTGACTGCCTCAAATTAAGCTCTGAACATGAAGCACTTGATCTAGCAGACAGGGTTGAATCATCGATGTACACATGGAGACGTAAAGCTTGTCTTAGCCATTCAAAGTCATCATGGAAAGAAGTAAAAGATCTCATGGATGACACAGATTGGAAGGACAAAAACTACATTTTAGCTGATAGAGCTGAAGCATTGTTGTTTTGCCTCAAGCAAAGATATCCTGAACTTTCACAAACTTCTTTGGATACATGCAAGATCCAATACAACAAGGATGTGGGGAAAGCAGTGCTAGAAAGCTATTCAAGAGTTTTAGAAGGGCTAGCATTTAACATTGTTGCTTGGATTGAAGATGTTCTTTATGTAGATAAATCGATGGCGAATCGAGAAGTCTAG 1443 0.4123 MDKSFKFGENCDVEYHPSPSMDHHSVSDTPAFSRLSGDSFGYCRVWTSSEASNSNFSDSVDDSSYASESSPLPSPSPSRWREVKPGLSRLGMKLRKHSVDNKLDDIDLLDSDELEMMKERFAKLLLGEDMSGGGKGVSTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREIKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILESFEDTEFWYAENISASSPRLRAASFRKIAPRKDEKWWLPVPCVLPGGLSEKSRKHLTEKRDCANQIHKAAMAINSNILADIDIPETYIDDLPQSGRGNLGDTIYHYMYTADKFSPERLLDCLKLSSEHEALDLADRVESSMYTWRRKACLSHSKSSWKEVKDLMDDTDWKDKNYILADRAEALLFCLKQRYPELSQTSLDTCKIQYNKDVGKAVLESYSRVLEGLAFNIVAWIEDVLYVDKSMANREV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2701 480 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 113 475 IPR005512 GO:0005085
Mal3g2701 480 Gene3D PRONE domain, subdomain 1 347 480 - -
Mal3g2701 480 Gene3D PRONE domain, subdomain 1 109 346 - -
Mal3g2701 480 ProSiteProfiles PRONE domain profile. 104 480 IPR005512 GO:0005085
Mal3g2701 480 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 325 - -
Mal3g2701 480 MobiDBLite consensus disorder prediction 51 76 - -
Mal3g2701 480 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 325 IPR038937 GO:0005085
Mal3g2701 480 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 325 480 IPR038937 GO:0005085
Mal3g2701 480 MobiDBLite consensus disorder prediction 51 83 - -
Mal3g2701 480 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 325 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2701 Mal-Chr3 100297261 100300026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2701 - - gmx:100811579 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2701 3 100297261 100300026 Mal3g2701 3 100297261 100300026 ECH
Mal3g2701 3 100297261 100300026 Mal5g1364 5 24430947 24434465 PCT