Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1185 ATGAAGGAAATAATTGAACATTTTGACATGGAAAAAGTGATAGAAGAATTTGAGAGGTTAACAAAGGATGCTGAGAATGTTCAAAAGGAAACACTGAAGAAGATTTTGGAAGTAAATGCATCAGCTGAATATTTGCAGAGTTTAGGATTGAATGGTAGAACTGATCCTGAAAGTTTCAAGGCTTGTGTTCCATTGGTCACTTACAAGGATTTGGAGCCTTATATCAATAGAATAGTTGATGGTGATTTTTCTCCTATTCTCACTGGAAAACCAATCACAGATGTTTCTTTAAGAGAGTTTCCTATCCAAAATGGCAAGGCCTTAAGCTTTATATACAGCAGCAAATCATCACAAACAAAAGGGGGTGTGACAGCAGGAACAGCCACAGCAAATGTGTTCAGAAATCCAGGATACAAGCATGCAATGAAGGCATTCAAATCCCCTAGTGTCAGTCCAGATGATGTAATATTTAGTCCTGATTTTCACCAATCACTCTACTGTCACCTCTTATGTGGACTACTTTTCAGAGAAGAAATTCAATTAATTAACTCAACATTTGCTCACAGCCTTGTTTATGCTTTTAGAACATTTGAGCAAGTTTGGGAAGAACTTGTTAATGACATCAAAGAAGGTGTTCTTAGCAATAGGGTAACACATCCATCCATTAGAACTGCTATGTCAAAACTTCTGAAACCAAATCCTGAACTAGCTAACTTGATCCACAAGAAATGCATGGGATTAAGCAATTGGTATGGATTGATACCAGAGCTTTTTCCTAATGTTAAGTATATTCAAGGGATCATGACAGGTTCAATGGAACATTACTTGAACAAATTGAGACACTATGCAGGAGAGGTTCCTTTGTTGACTTCTGAGTATGGTGCTTCTGAAGGTTGGATTGCTTCAAATGTGAATCCTAAAGTGGCTCCTGAATTTGCTACTTATGTTGTTCTTCCTCAAATTGCTTACTTTGAATTCATTCCTTTGACACAACTTGATGGAACTAAGGTGGATCTTGAGACAGTTGGATTAACTGAGGTGAAGATTGGTGAGAAGTATGAAGTTGTTTTCACCAATCCTGCAGGCTTATACAGATATAGGCTAGGAGATGTGGTAAAGGTTATGGGATTCCGTAACTCAGCTCCAGAAATCAAGTTTCTTTGCAGGAGCAACCTTATGCTCACAATCAACATTGACAAGAACACTGAGAATGATCTACAACTATCTGTGGAAGCAGCGTCCAAGTTGTTAGCTGAGGAGAAAATGGAAGTGATTGACTACACTAGCTACATTGACATGTCAAAAGAACCAGGACACTATGTTATCTTTTGGGAAATCAGTGGTGAAGCAAGTGATGAAGTGCTTGGTGAATGTTGCACATGTTTGGACAAGTCTTTTGTTGATGCTGGCTACATTACTTCTAGAAAAGTCAAAGGTATTGGGGCCCTCGAACTCCGACTTGTTCGGAAAGGAACATTCCAGAAGATTCTTGAGTATTATGTTGAATCAGGTAGAGCTGTGGCTCAATTCAAGACACCTAGGTGTATTGGTCCTACAAACACCCAAGTGTTGCAAATATTATTGGAAAATGTTGTTAAGAACTATTTTAGTTCTGCTTACAATTGA 1626 0.3825 MKEIIEHFDMEKVIEEFERLTKDAENVQKETLKKILEVNASAEYLQSLGLNGRTDPESFKACVPLVTYKDLEPYINRIVDGDFSPILTGKPITDVSLREFPIQNGKALSFIYSSKSSQTKGGVTAGTATANVFRNPGYKHAMKAFKSPSVSPDDVIFSPDFHQSLYCHLLCGLLFREEIQLINSTFAHSLVYAFRTFEQVWEELVNDIKEGVLSNRVTHPSIRTAMSKLLKPNPELANLIHKKCMGLSNWYGLIPELFPNVKYIQGIMTGSMEHYLNKLRHYAGEVPLLTSEYGASEGWIASNVNPKVAPEFATYVVLPQIAYFEFIPLTQLDGTKVDLETVGLTEVKIGEKYEVVFTNPAGLYRYRLGDVVKVMGFRNSAPEIKFLCRSNLMLTINIDKNTENDLQLSVEAASKLLAEEKMEVIDYTSYIDMSKEPGHYVIFWEISGEASDEVLGECCTCLDKSFVDAGYITSRKVKGIGALELRLVRKGTFQKILEYYVESGRAVAQFKTPRCIGPTNTQVLQILLENVVKNYFSSAYN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1185 541 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 98 541 IPR004993 -
Mal5g1185 541 Coils Coil 10 30 - -
Mal5g1185 541 Pfam GH3 auxin-responsive promoter 100 516 IPR004993 -
Mal5g1185 541 Pfam GH3 auxin-responsive promoter 16 94 IPR004993 -
Mal5g1185 541 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 98 541 - -
Mal5g1185 541 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 99 - -
Mal5g1185 541 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 99 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1185 Mal-Chr5 21186509 21189242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1185 9 538 EF-hand Containing Proteins AT1G23160 37.197 9.24e-127 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1185 K14506 - gmx:100806209 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5123 3 131340418 131343836 Mal5g1185 5 21186509 21189242 PCT