Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5123 ATGTTAGAGAAAGTAAAAGAGTTTAACATGGAAAATGTTATAGAAGAATTTGAGTCAATGACTAAGGATGCAGAAAGGGTTCAAAGGGAAACACTCAAAAGAATTTTGGAAGTTAATGCATCAGCTGAATATTTGCAGAATTTTGGTCTTAATGGAAGAACTGATCCTGAGAGTTTCAAGGCTTGTATTCCACTAGCTACTCACAAAGACTTGGAACCTTTTATCTATAGAATTCTTGATGGTGATGCTTCTCCTATTCTTACTGGAAAATCTATTACCACTATGTCTTTAAGTTCTGGCACTACTCAGGGGAAGCCAAAATATATACCATGGAATGATGAATTGTTTGAAACCACAATGCAGATATATCGGACCTCTTTTGCCTATAGGAACAGAGATTTTCCTATAAAAAATGGGAAGGCTTTAAATTTTATATATGGAAGCAAACAGTTCAAAACAAAAGGGGGTCTCATAGCTACAACTGCTACAACCAATGTGTTTCGCAATCCATCTTACAAACATGCAATGAAGGCACTTCAATCCCAATGTTGCAGTCCAGATGAAGTGATATTTGGTGGCGATTTTTTCCAATCATTGTACTGCCATCTATTATGCGGACTAATTTTCTGCGAGGAAGTTCAGTTGGTATCTTCAACATTTGCACATAGCATTGTTCATGCTTTCAGAGCCTTTGAACAAGTTTGGGAAGAGCTTTGTAATGATATAAGAGAAGGTGTTCTTACTAGCAGAGTCACAGTTCCGTCCATTCGAACGGCTATGTCTAAATTGCTCAAACCAAATCCAGAATTAGCTAACATAATCCACAAAAAATGTATGGGATTAAGCAACTGGTATGGTTTGATACCAGAGCTTTTTCCCAATGCAAAGTACATTTATGGAATCATGACAGGTTCTATGGAACCATATTTGGCGAAACTGAGGCACTATGCAGGGGTAATACCTTTGTGTACTGCTGATTATGGAGCTTCTGAAGGTTGGATAGCTGCAAATGTTAACCCAAAACTTCCACCTGAATTGGCAACTTATGTTGTGCTTCCTCAAATTGGTTACTTTGAGTTCATTCCTCTCACAACACTTGAGAATGAAAATACTTTCCTCTGTGTAAATCCTCAGCCAGTGGGACTCACTGAGGTCAAGGTTGGTGAAGAGTATGAAATTGTTATGACTACTCCAACAGGTTTATACAGGTATAGGCTAGGGGATGTGGTAAAAGTTATGGGATTCCATAACTCAACTCCAGAACTAAAGTTTATTCGTAGGAGTAGTCTTCTACTGAACATTAACATTGATAAGAACACAGAAAAAGATTTGCAATTAGCTGTGGAAGCAGCAGCGAAATTATTAGTAGAAGAGAAATTGGAAGTTGTTGAGTTCACAAGCCATGTTGATTTATCCAAAGAACCAGGGCACTACGTAATCTTCTGGGAAATCAGTGGCGAAGCAAGTGAAGAAGTGTTGAGTGAATGCTGCAACTGTTTGGACAAGTCTTTCGTCGATGCAGGCTACACTAGTTCTCGTAAAGTCAACGCTATTGGAGCCTTAGAACTTCGAGTTGTTAGGAAAGGAACATTTCAAAAGATACTTGATCATTACCTTGGATTAGGAACAGCTGTTAGTCAGTATAAAACACCAAGATGTGTAGGTCCTACACACAACATTGTGTTGCAAATATTGAGTGAAAATGTTGTCAAGAGCTATTTCAGTACTGCATTCAATTGA 1740 0.3816 MLEKVKEFNMENVIEEFESMTKDAERVQRETLKRILEVNASAEYLQNFGLNGRTDPESFKACIPLATHKDLEPFIYRILDGDASPILTGKSITTMSLSSGTTQGKPKYIPWNDELFETTMQIYRTSFAYRNRDFPIKNGKALNFIYGSKQFKTKGGLIATTATTNVFRNPSYKHAMKALQSQCCSPDEVIFGGDFFQSLYCHLLCGLIFCEEVQLVSSTFAHSIVHAFRAFEQVWEELCNDIREGVLTSRVTVPSIRTAMSKLLKPNPELANIIHKKCMGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLAKLRHYAGVIPLCTADYGASEGWIAANVNPKLPPELATYVVLPQIGYFEFIPLTTLENENTFLCVNPQPVGLTEVKVGEEYEIVMTTPTGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAAKLLVEEKLEVVEFTSHVDLSKEPGHYVIFWEISGEASEEVLSECCNCLDKSFVDAGYTSSRKVNAIGALELRVVRKGTFQKILDHYLGLGTAVSQYKTPRCVGPTHNIVLQILSENVVKSYFSTAFN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5123 579 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 579 IPR004993 -
Mal3g5123 579 Coils Coil 10 30 - -
Mal3g5123 579 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 579 - -
Mal3g5123 579 Pfam GH3 auxin-responsive promoter 16 554 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5123 Mal-Chr3 131340418 131343836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5123 17 576 EF-hand Containing Proteins AT1G23160 37.913 2.24e-132 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5123 K14506 - gmx:100794598 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5123 3 131340418 131343836 Mal3g5123 3 131340418 131343836 ECH
Mal3g5123 3 131340418 131343836 Mal5g1185 5 21186509 21189242 PCT