Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0636 ATGCAAAAGAATGTTTTGGACATCAATGCCATTAGTAGTGCAACTCAAAGCGCCACTAGTTTAGTCAAAAGTGGATTCAATGCTTTTACTAGTGTCGCCGGCGCTATAATTGACACCGGCGGGGCCTTCCTCGGCCGTTCTGTGGCTCTTTGGTTGATTAGTGCTACCGCTGCTGATGGAAGTGGAAAAGGGAAAGTGGGGAAAAAAACGTATCTGGAAGGTTTTGTTACTTCTGCACCAATTTTGGGAGCAGGACAATCTGCATTTGATATTCATTTTGAATGGGATAGTGAAATGGGAATTCCAGGAGCATTTTATATTGAGAATTATATGCAAGGTGGAGAATTTTTCCTTGTAAGTTTGACCCTTGAAGATATTCCCAACCATGGAACCATCAACTTTGTTTGCAACTCTTGGATTTACAATGCTAAAAATTACAAAACTGAACGCATCTTCTTTGCGAACAAGACATACCTTCCAAGTGAAACACCGGCTCCATTAGTGTACTATAGACAAGAGGAATTGAAGACTTTAAGAGGAGATGGAACGGGTGAGCGCAAAGAATGGGAAAGGATATATGACTACGATGTTTACAATGATTTGGGTGATCCTGACAAGAATGCTAGTTTTGCTCGTCCCGTTGTTGGAGGATCCAACAACTTGCCTTACCCTCGAAGAGGGAGAACCGGCAGGAAACCAGCTAAGAAAGATCCTAAAAGTGAGCGTCGGAGTGACATTGTTTACATTCCAAGAGATGAATCATTTGGTCACTTGAAGTCTTCAGATTTTCTGGTTTACATACTCAAATCAGCATCTCAAAATATCATACCTCAATTACGATCTGCAGTTACATTACAACTCAATCGGCCAGAATTTAACACCTTTGATGATGTGCGATCATTTTATGATGGTGGAATTAAATTACCTACGAATTTCCTTAGCCAAATTAGCATCATACCATTCTTCACGGAACTCTTTCGAACTGATGGTGAATCGGCTCTAAAGTTTCCACCACCAAAAGTGATTCAAGTTAATCAGTCTGCATGGATGACTGATGAAGAATTTGCAAGGGAGATGATTGCTGGTGTGAATCCACACATCATCAAAAGACTTCAGGAGTTCCCACCAAAGAGCAAGCTAGATAACCAAGTCTACGGTGATCATACGAGCACAATAACCAAAGAACAGTTACAGCTAAATATGGATGGGGTCACTGTAGAAGAAGCTATCCAAAACAACAGGCTTTACATACTTGATCACCATGACCCAATATTTCAATATTTGAGGAAAATAAATGGAGATGATACAAAGGCATATGCTACTAGAACCATCATTTTCTTGCAAAATGATGGAACATTGAAGCCATTAGCCATTGAGCTAAGCAGCCCACATCCTCAGGCTGATGGTTTAGGTCCTGTTAGTAAAGTTTACTTGCCTGCAAGTGAAGGTGTTGAAGCCTCAATTTGGCTCCTTGCCAAGGCTTACGTTATCGTAAATGACTCTTGTTTTCACCAACTTGTTAGCCACTGGTTGAACACTCACGCTGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCACCCTATTCATAAACTTTTGCTTCCACATTATCGTGATACAATGAACATTAACGCACTTGCAAGGAGTGTCTTGGTAAATGCAGAGGGTATTATAGAATCAACATTCTTAATGGGAAATTGTTCTTTAGAATTTTCTGCTGTATTATATAAGGATTGGGTTTTCACAGAGCAAAGTCTGCCTAATGACCTTCTCAAAAGAGGAGTGGCTGTTGAGGATCCAACTTCTCTGCACGGCATTCGCCTTCTGATAGAGGACTACCCTTATGCTGCTGATGGACTTGAGATATGGGCTGCTATCAAGTCGTGGGTTGAAGAGTATGTGAATTTCTACTACAAGTCAGATGTTAATGTTGCGCAAGATTCTGAACTCCAAGCATTTTGGAGAGAAGTTATAGAGGTGGGTCATGGTGATTTGAAGAATGCTACATGGTGGTTTAAGATGCAAACTCGTACGGAGTTGATTGAAGCTTGCACTATCCTTATATGGATTGCTTCAGCACATCATGCAGCTGTTAATTTTGGACAATATCCGTATGGTGGGTACATCCTTAACCGACCAACTAAGAGCAGGAGATTCATGCCTGAGAAAGGATCTGCTGAGTATGAGGAGCTTTCTAAGAACTTTCAGAAGGCGTATCTGAGGACAATCACACCAAAAAATGATACCCTCACTGACCTTACAATCTTAGAGGTCTTGTCAAGGCATGCTTCTGATGAGCAATACCTTGGACAGAGAAATGAGGGTGATATTTGGACTTCTGATTCACAGCCATTAGAGGCTTTCAAGAGGTTTGGAAGGAAGTTGGCTGAAATTGAGGGAAAGCTCATCCAAAGGAACAATGACGAGTCATTGAGGAACCGATATGGGCCTGTGAATATGCCTTACACTTTGCTTTATCCTTCTAGTGAGAAAGGATTGACTTGCAGAGGCATTCCTAATAGTATCTCCATCTAA 2550 0.4118 MQKNVLDINAISSATQSATSLVKSGFNAFTSVAGAIIDTGGAFLGRSVALWLISATAADGSGKGKVGKKTYLEGFVTSAPILGAGQSAFDIHFEWDSEMGIPGAFYIENYMQGGEFFLVSLTLEDIPNHGTINFVCNSWIYNAKNYKTERIFFANKTYLPSETPAPLVYYRQEELKTLRGDGTGERKEWERIYDYDVYNDLGDPDKNASFARPVVGGSNNLPYPRRGRTGRKPAKKDPKSERRSDIVYIPRDESFGHLKSSDFLVYILKSASQNIIPQLRSAVTLQLNRPEFNTFDDVRSFYDGGIKLPTNFLSQISIIPFFTELFRTDGESALKFPPPKVIQVNQSAWMTDEEFAREMIAGVNPHIIKRLQEFPPKSKLDNQVYGDHTSTITKEQLQLNMDGVTVEEAIQNNRLYILDHHDPIFQYLRKINGDDTKAYATRTIIFLQNDGTLKPLAIELSSPHPQADGLGPVSKVYLPASEGVEASIWLLAKAYVIVNDSCFHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARSVLVNAEGIIESTFLMGNCSLEFSAVLYKDWVFTEQSLPNDLLKRGVAVEDPTSLHGIRLLIEDYPYAADGLEIWAAIKSWVEEYVNFYYKSDVNVAQDSELQAFWREVIEVGHGDLKNATWWFKMQTRTELIEACTILIWIASAHHAAVNFGQYPYGGYILNRPTKSRRFMPEKGSAEYEELSKNFQKAYLRTITPKNDTLTDLTILEVLSRHASDEQYLGQRNEGDIWTSDSQPLEAFKRFGRKLAEIEGKLIQRNNDESLRNRYGPVNMPYTLLYPSSEKGLTCRGIPNSISI* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0636 849 PRINTS Plant lipoxygenase signature 373 392 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 150 171 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 222 241 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 761 775 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 124 142 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 334 350 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 189 205 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 289 310 IPR001246 GO:0016491
Mal5g0636 849 PRINTS Plant lipoxygenase signature 439 463 IPR001246 GO:0016491
Mal5g0636 849 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 157 849 IPR013819 GO:0016702|GO:0046872
Mal5g0636 849 Gene3D PLAT/LH2 domain 1 158 - -
Mal5g0636 849 Gene3D - 482 848 - -
Mal5g0636 849 ProSitePatterns Lipoxygenases iron-binding region signature 1. 504 518 IPR020833 GO:0016702|GO:0046872
Mal5g0636 849 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 1 158 IPR036392 GO:0005515
Mal5g0636 849 Pfam Lipoxygenase 167 832 IPR013819 GO:0016702|GO:0046872
Mal5g0636 849 Gene3D - 259 347 IPR027433 -
Mal5g0636 849 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 24 849 - -
Mal5g0636 849 Gene3D - 159 258 - -
Mal5g0636 849 PRINTS Lipoxygenase signature 486 503 IPR013819 GO:0016702|GO:0046872
Mal5g0636 849 PRINTS Lipoxygenase signature 524 544 IPR013819 GO:0016702|GO:0046872
Mal5g0636 849 PRINTS Lipoxygenase signature 504 521 IPR013819 GO:0016702|GO:0046872
Mal5g0636 849 SUPERFAMILY Lipoxigenase 159 849 IPR036226 -
Mal5g0636 849 MobiDBLite consensus disorder prediction 209 243 - -
Mal5g0636 849 PANTHER LIPOXYGENASE 24 849 IPR000907 GO:0016702|GO:0046872
Mal5g0636 849 Pfam PLAT/LH2 domain 60 153 IPR001024 GO:0005515
Mal5g0636 849 Gene3D - 348 481 - -
Mal5g0636 849 SMART LH2_4 1 155 IPR001024 GO:0005515
Mal5g0636 849 ProSiteProfiles PLAT domain profile. 31 154 IPR001024 GO:0005515
Mal5g0636 849 ProSitePatterns Lipoxygenases iron-binding region signature 2. 531 541 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0636 Mal-Chr5 10191998 10196828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0636 21 849 Acyl Lipid Metabolism Gene Families AT3G22400 55.412 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0636 K15718 - gmx:100816880 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0636 5 10191998 10196828 Mal4g0414 4 3567336 3571035 PCT