Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0110 ATGGCGACAATTAACCCTTTTGATTTGTTGGGTGACGATGCTGAAGACCCTTCACAGTTGATTGCTGCTGAGCAACAGAAAGCGGCGGCTGCAGCGGCGGCAGCGGCGGCGGCGCCCAAAAAGGGGACTGAACAAGGCAAGCAAGCTGCTGCTGTGAAAAAGCCTGCTCAGTTACCTTCCAAACCACTTCCACCTTCTCAGGCTGTGAGGGAGTCCAGAAATGAGCCTTCTCGTGGTGGCCGTGGAGGCGGACGTGGATTTGGACGTGGTCGCGGTGATGGTGGCTTTCGTCGTGATTATTCCAATGATGAAAACCCATTGCCTGCTCCTCCTGCCAATCAAGGTTCTTTCGAAGGAGATTCTGGGAATCCCACTGAAAGACGGGGTTATGGTGCACCCCGTGGTCCTTATCGCGGTGGCGGTCGTCGTGGAGGTTTTAGCAATGGTGAAGCTGGTGAAGAAGGACGCCCACGAAGGACATTTGATCGCCACAGCGGGACTGGACGAGGTGGTGGATTCAAACGTGAAGGTGCTGGACGAGGGAATTGGGGAACTCAATCTGATGAAATTGCTCAGGTGACTGAGGAAGTGACGAATGAAACCGAAAAGAATGTGGCTGAGGAGAAGCCTGCTGGCGAGGAAGATGCAGCAGCTGATGGAAACAAGGAAACTCCTGCTGCTGAAGCTGAAGAAAAGGAGCCTGAGGATAAGGAGATGACACTGGAAGAATATGAGAAAGTGCTGGAGGAGAAAAGGAAAGCCCTGAATGTTAAGACTGAAGGGAGAAAGGTGGATACTAAGGAGTTTGAATCCATGAAGCCACTGTCATGCAAGAAAGAGAATGATGAGATCTTTGCTAAACTGGGATCTGACAAGGACAGGCGCAAAGATGCTATTGAGAAGGAGAAGGCAAGGAAGGCTCTGAGCATTAACGAGTTTCTGAAGCCTGCTGAAGGAGAGAAGTACTATAACCCAGGTGGACGTGGCGGTCGTGGTGGACGTGGCGGCCGTGGTGGTTCAAGGGGAGGAGGTTACGGTGGCAATGTCCCAGCCCCATCTATTGAGGACGCTGATCAATTCCCAACCTTGGGTGGTGGCAAGTGA 1104 0.5245 MATINPFDLLGDDAEDPSQLIAAEQQKAAAAAAAAAAAPKKGTEQGKQAAAVKKPAQLPSKPLPPSQAVRESRNEPSRGGRGGGRGFGRGRGDGGFRRDYSNDENPLPAPPANQGSFEGDSGNPTERRGYGAPRGPYRGGGRRGGFSNGEAGEEGRPRRTFDRHSGTGRGGGFKREGAGRGNWGTQSDEIAQVTEEVTNETEKNVAEEKPAGEEDAAADGNKETPAAEAEEKEPEDKEMTLEEYEKVLEEKRKALNVKTEGRKVDTKEFESMKPLSCKKENDEIFAKLGSDKDRRKDAIEKEKARKALSINEFLKPAEGEKYYNPGGRGGRGGRGGRGGSRGGGYGGNVPAPSIEDADQFPTLGGGK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0110 367 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 366 IPR039764 GO:0003723
Mal5g0110 367 SMART HABP4_PAI_RBP1_2 157 265 IPR006861 -
Mal5g0110 367 MobiDBLite consensus disorder prediction 200 240 - -
Mal5g0110 367 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 366 - -
Mal5g0110 367 Pfam Hyaluronan / mRNA binding family 157 263 IPR006861 -
Mal5g0110 367 Gene3D - 155 268 - -
Mal5g0110 367 Pfam Stm1 1 83 IPR019084 -
Mal5g0110 367 MobiDBLite consensus disorder prediction 318 367 - -
Mal5g0110 367 MobiDBLite consensus disorder prediction 27 240 - -
Mal5g0110 367 MobiDBLite consensus disorder prediction 185 199 - -
Mal5g0110 367 MobiDBLite consensus disorder prediction 152 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0110 Mal-Chr5 2212973 2216589 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0110 K13199 - gmx:100791259 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0110 5 2212973 2216589 Mal5g0110 5 2212973 2216589 ECH
Mal5g0110 5 2212973 2216589 Mal3g2954 3 104182887 104186189 PCT