Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2954 ATGGCCACTACCAATCCATTTGATTTGCTTGGTGATGACGCTGAAGACCCTTCTCAGCTCATCGTTGCTGAACAGCTCAAAGCTGCTGCTGCTCCTCCTCCTGCTAAGAAAGGTGCTGCTGTCAAGGAACAGGGCAAGCCTAATAAGCCTGCTTTGTTGCCTTCTAAGCCTACTCCTCCTGCTCAGGCTGTGAGGGAGTCCAGAAATGAAGGAGGCCGTGGTGGTGGTCGTGGATTTGGCGGACGAGGAGGAGGCCGTGGGTTTGGCGGTGGACGTGGAGGTCGCGGTTTTGGTCGTGACTACTCAAATGACGACAATTCGTTCCCTGCTTCTGGGACTCCTGAAAATCAGGGTCCTATTGAAGAAGGTGATAGATCTTCAGAGAGACGTAGCTATGGTGGACCACGAGGTCCGTACCGCGGAGGTCGTCGTGGAGGTTTCAACAATGGTGATGCTGGTGAAGAGGGACGACCCCGAAGAACATTTGAACGCCACAGTGGCACTGGGCGAGGAAATGAATTCAAGCGTGAAGGTGCTGGAAGGGGTAACTGGGGAACAGAAACTGATGAAATTGCTCAGGTGACTGAAGAAGTCGTGAATGAAGGTGAAAAGAATTTGGGCGATGAGAAGCCTGCAGCTGAAAATGATGTTGCTGCTGAAGGGAACAAGGATAGCCCTGTTGAGGCTGAAGAAAAAGAGCCTGAAGACAAGGAGATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGAAAGGCTTTGCAGGCTCTCAAGACTGAAGAGAGAAAGGTTGACGCTAAAGCGTTTGAAAACTTGCAGGCCTTGTCGTGCAAGAAAGACAACACTGAAATCTTTGCTAAATTGGGATCTGATAAGGATAAGCGCAAAGAGGCTTATGACAAGGAAGAGAAAGCCAAGAAGTCTGTCAGCATCAATGAGTTTCTGAAGCCAGCTGAAGGAGAATCCAACTATAGCTCAGGTGGGCGTGGCAGGGGACGCGGCCGTGGTACTCGAGGAGGTTTCCGTGGAAATTCGTACAGCAATGCACAAGCTCCATCCATTGAAGATCCTAGTCATTTCCCAACCTTGGGTGCCAAGTGA 1104 0.5036 MATTNPFDLLGDDAEDPSQLIVAEQLKAAAAPPPAKKGAAVKEQGKPNKPALLPSKPTPPAQAVRESRNEGGRGGGRGFGGRGGGRGFGGGRGGRGFGRDYSNDDNSFPASGTPENQGPIEEGDRSSERRSYGGPRGPYRGGRRGGFNNGDAGEEGRPRRTFERHSGTGRGNEFKREGAGRGNWGTETDEIAQVTEEVVNEGEKNLGDEKPAAENDVAAEGNKDSPVEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEERKVDAKAFENLQALSCKKDNTEIFAKLGSDKDKRKEAYDKEEKAKKSVSINEFLKPAEGESNYSSGGRGRGRGRGTRGGFRGNSYSNAQAPSIEDPSHFPTLGAK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2954 367 MobiDBLite consensus disorder prediction 342 356 - -
Mal3g2954 367 Pfam Stm1 1 77 IPR019084 -
Mal3g2954 367 Coils Coil 241 268 - -
Mal3g2954 367 Pfam Hyaluronan / mRNA binding family 158 265 IPR006861 -
Mal3g2954 367 MobiDBLite consensus disorder prediction 27 240 - -
Mal3g2954 367 MobiDBLite consensus disorder prediction 290 311 - -
Mal3g2954 367 SMART HABP4_PAI_RBP1_2 158 266 IPR006861 -
Mal3g2954 367 Gene3D - 156 269 - -
Mal3g2954 367 MobiDBLite consensus disorder prediction 153 183 - -
Mal3g2954 367 MobiDBLite consensus disorder prediction 290 367 - -
Mal3g2954 367 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 367 - -
Mal3g2954 367 MobiDBLite consensus disorder prediction 201 240 - -
Mal3g2954 367 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 367 IPR039764 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2954 Mal-Chr3 104182887 104186189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2954 K13199 - gmx:100814825 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0110 5 2212973 2216589 Mal3g2954 3 104182887 104186189 PCT