Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0024 ATGAAATTGAGGACAAGGCTAAGTTTTTTATGGTGTGTTTGGATTTACCTTTGTGGGTCATGTGTTGGGAGATTTGTGGTAGAAAAAAACAATTTGAAAATAACTTCTCCAAAATCATTGAGAGGTATATATGAATGTGCAATTGGAAATTTTGGGGTCCCAAAATATGGAGGAACAATGATTGGGACAGTTGTGTATCCAAGGTTTAATCAGAATGGTTGCACCAAATTTAATGATGCAGACACTTCCTTGAATTCCAAGCCAGGAAGCTTCCCTACCTTTGTTCTTGTTGATCGGGGAGATTGTTATTTCACTTTAAAGGCGTGGAATGCTCAGACTGGTGGAGCAGCCGCTATTCTTGTTGCAGATGATAGGATAGAACCATTGATCACAATGGACACTCCTGAAGAAGGGAACGGTGCTACTAACGACGATTATGTTGAAAAGATTACAATCCCTTCTGCACTTATCAGCAAATCACTCGGTGACAGTATCAAGACGGCTCTCTCAAGTGGAGCAATGGTGAACGTAAATCTCGATTGGAGAGAGGCACTTCCACACCCTGATGAGAGAGTTGAGTATGAGTTATGGACAAGTAGCAATGATGAGTGTGGTCCAAAGTGTGAGAGTGAAATTAATTTCTTGAAGAGTTTTAAAGGAGCAGCTCAATTACTTGAGCAAAAAGGTTACACTCAGTTTACACCGCACTATATAACTTGGTATTGTCCAGAAGCATTCATCTTAAGCCAACAGTGTAAATCTCAGTGCATTAATAATGGGAGGTACTGTGCACCTGATCCTGAGCAAGATTTCAGTAGAGGGTATGATGGAAAAGATGTCGTTATTCAAAACTTGCGCCAATCTTGCTTCTTTAAAGTTGCAAATGAAAGTGGTAAGCCTTGGCAATGGTGGGACTACGTTACCGACTTTGCAATTCGATGTCCAATGAGAGAAAGTAAATACACCGAAGAATGCTCAGATCAAGTTGTTAAATCTCTTGGTGTTGATTTGAAAAAGATTAAAGACTGTATTGGGGATCCCAATGCAAATGTTGAAAATCTTGTTCTTAAGGCCGAACAGGATGCACAGATTGGACATGGTACTCGTGGTGATGTCACTATACTTCCCACTCTCGTTATAAACAACAGACAGTATAGAGGGAAGCTATCAAAAGCAGCAGTACTAAAGGCAATCTGTGCAAGTTTCCAAGAGACCACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTTTGGCAAACAATGGTGGTTGTTGGCAGGACAAAGCTGCCAACATTACTGCATGCAGGGACACTTTTCGAGGAAGAGTATGTGAATGCCCTATTGTACAAAATGTAAAATTTGTTGGTGATGGATATACACACTGTGAAGCTAGTGGACCCTTGAGGTGTGCAGTCAACAATGGAGGTTGTTGGCAGGGAGCCCAAGCCGGCAGGGCTTACTCTGCTTGTATCGATGACCATACAAAAGGTTGCAAGTGTCCACCTGGATTCAAGGGAAATGGAGTCCACTCCTGTGAAGATGTGGATGAGTGCAAAGAGAAATTGGCCTGTCAGTGCCCAGAATGCAGCTGCAAAAATACCTGGGGGAGTTATGAATGCAGATGCAATAATGGTTTGTTCTATGTGCGGGAAAGTGACATGTGTATTGGTAAATATAGCGCTTCGGTGTCTAGCGGGGGATTCATTTGGATGGTTATACTGATATTGGGTATTGGTGGTACTGGGGGATATGCTTTCTACAAGTACAGAATCCAGAGATATATGGATTATGAGATAAGGGCAATAATGTCCCAATACATGCCATTGGATAATCAACCGGAGAACTCAAATCAAGTGCAGCATGCTGTCTAG 1884 0.4183 MKLRTRLSFLWCVWIYLCGSCVGRFVVEKNNLKITSPKSLRGIYECAIGNFGVPKYGGTMIGTVVYPRFNQNGCTKFNDADTSLNSKPGSFPTFVLVDRGDCYFTLKAWNAQTGGAAAILVADDRIEPLITMDTPEEGNGATNDDYVEKITIPSALISKSLGDSIKTALSSGAMVNVNLDWREALPHPDERVEYELWTSSNDECGPKCESEINFLKSFKGAAQLLEQKGYTQFTPHYITWYCPEAFILSQQCKSQCINNGRYCAPDPEQDFSRGYDGKDVVIQNLRQSCFFKVANESGKPWQWWDYVTDFAIRCPMRESKYTEECSDQVVKSLGVDLKKIKDCIGDPNANVENLVLKAEQDAQIGHGTRGDVTILPTLVINNRQYRGKLSKAAVLKAICASFQETTEPSICLTPDMETNECLANNGGCWQDKAANITACRDTFRGRVCECPIVQNVKFVGDGYTHCEASGPLRCAVNNGGCWQGAQAGRAYSACIDDHTKGCKCPPGFKGNGVHSCEDVDECKEKLACQCPECSCKNTWGSYECRCNNGLFYVRESDMCIGKYSASVSSGGFIWMVILILGIGGTGGYAFYKYRIQRYMDYEIRAIMSQYMPLDNQPENSNQVQHAV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0024 627 Gene3D - 22 188 - -
Mal5g0024 627 Gene3D Laminin 472 555 - -
Mal5g0024 627 SUPERFAMILY PA domain 94 175 IPR046450 -
Mal5g0024 627 Gene3D Glutaredoxin 270 402 - -
Mal5g0024 627 Gene3D Laminin 412 457 - -
Mal5g0024 627 CDD EGF_CA 518 549 - -
Mal5g0024 627 PANTHER VACUOLAR-SORTING RECEPTOR 1 11 607 - -
Mal5g0024 627 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 607 - -
Mal5g0024 627 Pfam PA domain 62 165 IPR003137 -
Mal5g0024 627 SMART egfca_6 518 560 IPR001881 GO:0005509
Mal5g0024 627 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0024 Mal-Chr5 423858 428217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0024 6 621 Miscellaneous Gene Families AT3G52850 70.874 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0024 - - gmx:100815266 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2493 3 96725683 96731909 Mal5g0024 5 423858 428217 PCT