Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2493 ATGTTCTGTAACAAGAGGATGAGGATTAAGTTGAATCTTTTGTTGTTATGTGTTTTGGTTTTATTGTTGGACTTGGAATGTTGTTTGGGAAGGTTTTTGGTGGAGAAGAATAGTTTGAAGATCATTTCTCCAAAATCGTTGAAGGGTAGTTATGAATGTGCAATTGGAAATTTTGGGGTGCCTCAATATGGTGGAACATTGGTTGGTTATGTCAAGTATCCTAATGTGAATCAGAAAGGATGCAAGAATTTTACTGATTTCAGTGCTTCGTTTCATTCCATACCTGGAAGTTTCCCCACTTTTCTTCTTGTTGATCGTGGAGATTGCTACTTCACTTTGAAGGCATGGAATGCACAAAATGGTGGAGCAGGAGCTATTCTTGTAGCTGATGACAGAGAAGAAGTACTAATCACGATGGACACTCCTGAAGAAGGGAATGTTGTAATAGATGATTATATAGAAAAGATTAATATTCCTTCTGCTCTTATCAGCAAATCCTTGGGGGATAGAATCAAGAAGGCTCTCTCAAACGGGGAGATGGTTCCCATAAGCCTTGATTGGCAAGAGGCTCTTCCGCATCCTGATGACAGAGTTGAGTATGAATTATGGACAAATAGCAATGACGAATGTGGACCAAAGTGTGACAATCAAATTAATTTTGTGAAGAGCTTTAAAGGAGCAGCTCAGCTACTTGAGAAGAAGGGGTTCACTCAATTTACCCCTCACTATATAACTTGGTATTGCCCTAAAGAATTTCTATTAAGCAAACGATGCAATTCTCAGTGTATAAACCACGGGCGATACTGTGCTCCGGACCCTGAGCAAGATTTCAATAAAGGGTATGATGGCAAAGATGTTGTTGTTCAGAACTTACGCCAAGCTTGCTTCTTTAAAGTGGCAAACGAAAGTGGAAGGCCTTGGCAATGGTGGGACTATGTGACCGATTTTTCAATCCGTTGCCCCATGAAAGAGAAAAAATACACAGAAGAATGCTCTGATCAAGTTATTAAATCTCTTGGTGTTGATCTGAAGAAGATTAAAGACTGTGTTGGGGATCCTCATGCTGATGTTGAAAATCCTGTTCTCAAAGCCGAACAAGATGCACAGATTGGCAAAGAGTCTCGTGGTGATGTTACTATAATGCCTACTCTTGTTATAAACAACAGACAATATAGAGGTAAGTTGTCAAGACCAGCAGTTCTCAAGGCAATATGTTCAGGTTTCCAAGAGACCACGGAACCATCAATTTGCTTAACTCCAGACATGGAAACAAACGAGTGTTTGGAAAACAATGGTGGTTGTTGGAAGGAAAAATCTTCTAATATTACTGCATGCAGGGACACTTTCCGAGGAAGAGTATGTGAATGCCCTGTTGTAAAAAACATAAAGTTTGTTGGCGACGGATTTACTCACTGTGAAGCTTCAGGAACCTTAAGCTGTGAATTCAACAATGGAGGTTGTTGGAAAGCATCCCATGGTGGAAGGCTTTACTCTGCTTGTCATGATGACTATAGAAAAGGTTGCGAGTGTCCTTTAGGATTCAGAGGTGATGGAGTCCTGACATGTGAAGATATTGATGAATGCAAAGAAAAGTCGGCCTGCCAGTGTCCACAATGCAAATGCAAAAATACCTTTGGGAGTTATGAGTGCAAGTGTAATAGCGGCTTACTCTACTCACGAGAAAATGACACGTGCATTGGTAAATATAATTCTTCAGTAGTGAGTATTTGGATGATTATCCTTGTCATGGTTGTTACCCTTTCTGGAGGATATGCATTTTACAAGTACAGAATCCAGAGATATATGGACACTGAGATTCGTGCAATTATGGCTCAATACATGCCCTTGGATAATCAACCTCTTATTATTCCTAATCCTAATCAAGTTCATCATGATATCTAG 1902 0.3991 MFCNKRMRIKLNLLLLCVLVLLLDLECCLGRFLVEKNSLKIISPKSLKGSYECAIGNFGVPQYGGTLVGYVKYPNVNQKGCKNFTDFSASFHSIPGSFPTFLLVDRGDCYFTLKAWNAQNGGAGAILVADDREEVLITMDTPEEGNVVIDDYIEKINIPSALISKSLGDRIKKALSNGEMVPISLDWQEALPHPDDRVEYELWTNSNDECGPKCDNQINFVKSFKGAAQLLEKKGFTQFTPHYITWYCPKEFLLSKRCNSQCINHGRYCAPDPEQDFNKGYDGKDVVVQNLRQACFFKVANESGRPWQWWDYVTDFSIRCPMKEKKYTEECSDQVIKSLGVDLKKIKDCVGDPHADVENPVLKAEQDAQIGKESRGDVTIMPTLVINNRQYRGKLSRPAVLKAICSGFQETTEPSICLTPDMETNECLENNGGCWKEKSSNITACRDTFRGRVCECPVVKNIKFVGDGFTHCEASGTLSCEFNNGGCWKASHGGRLYSACHDDYRKGCECPLGFRGDGVLTCEDIDECKEKSACQCPQCKCKNTFGSYECKCNSGLLYSRENDTCIGKYNSSVVSIWMIILVMVVTLSGGYAFYKYRIQRYMDTEIRAIMAQYMPLDNQPLIIPNPNQVHHDI* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2493 633 SMART egfca_6 524 566 IPR001881 GO:0005509
Mal3g2493 633 Gene3D Laminin 418 463 - -
Mal3g2493 633 CDD EGF_CA 524 555 - -
Mal3g2493 633 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 18 610 - -
Mal3g2493 633 SUPERFAMILY PA domain 102 191 IPR046450 -
Mal3g2493 633 Gene3D - 30 194 - -
Mal3g2493 633 ProSitePatterns Calcium-binding EGF-like domain signature. 524 550 IPR018097 GO:0005509
Mal3g2493 633 SUPERFAMILY EGF/Laminin 520 566 - -
Mal3g2493 633 Pfam PA domain 74 171 IPR003137 -
Mal3g2493 633 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 18 610 - -
Mal3g2493 633 Gene3D Laminin 478 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2493 Mal-Chr3 96725683 96731909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2493 14 633 Miscellaneous Gene Families AT3G52850 70.400 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2493 - - gmx:100807514 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2493 3 96725683 96731909 Mal3g2493 3 96725683 96731909 ECH
Mal3g2493 3 96725683 96731909 Mal5g0024 5 423858 428217 PCT