Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0016 ATGGCCACAACACAGATACAAATAAACAGCTCAACTCCATTTGATGAATACGAAGATTGGGAAAACAATATTCATACACCAAATTCCATCTTAATGGAGGAATGGCAGATGGTGCAAAAGAAAGGAAACAAATTTGTAGTGAATGAACAACCTTTCTATGTAAACGGATTCAACACCTATTGGTTGATGGTATTTGCTGCAGATGAGTCAACAAGAGGAAGGGTCACTCAGGTGTTCAAACATGCATCCTCAGTTGGTATGACAGTTTGTAGGACTTGGGCCTTCAATGATGGCCAATGGAGAGCCCTTCAGAAATCACCATCACTTTATGATGAACAAGTATTTAAGGCCCTTGATTTTGTGGTGACTGAAGCAAAGAAATACAGAATCAGACTCATATTATCATTGGTTAACAATTGGGAGGCATATGGTGGCAAAGCACAGTATGTCAAGTGGGGCAATGCTGCTGCTGGCCTTAACTTGACCTCTGATGATGACTTTTTTTCACATCCAACTCTCAGAGGCTACTACAAGGACCATGTCAAGACTGTACTCAATAGAGTTAACACATTCACAAATATCACTTATAAGGAAGATCCAACAATTTTTGCTTGGGAACTAATGAACGAGCCTCGTTGCACCTCTGACTCCTCCGGTGATACGTTACAGGAATGGATAAAAGAGATGGCATTCTATGTGAAGAGCGTTGATCCAAAACACCTGCTAGAGATTGGCCTAGAAGGATTTTATGGCCCCTCAACACCTCAGAGATTTCAGTTCAACCCAAATTCATATGCTCAACAGGTTGGAACCGATTTTATCAGAAACCACCAGGTTCTAGGTGTCGACTTTGCTTCTGTTCATATATATCCAGATTCTTGGATTTCACAATCAGTTGCTGATAGCCATATCCCATTTGTGAAGTCTTGGATGGAAGCCCACATAGAGGATGCTGAAAAGTATCTTGGAATGCCGGTTGTTTTTGGTGAGTTTGGTGTATCTGCAAAAGATCCTGGTTATAATTCAACATATAGAGATACACTTATAAATACTGTGTATAAGACAATTCTAAATTCTACAAAGAAGGGAGGTAGTGGGGCTGGAAGCCTTTTGTGGCAGTTCTTTCCTGATGGAACAGATTACATGGATGATGGTTATGCAATTGTTCTCTCAAAAGCTCCTTCTACTTCAAGCATGATATCCCTTCAATCCACAAGGCTTGCTCTATTCAACTCCCTCTGCTCTGAGAGATGCCACTGGGGTTGTAAGAAGAAAAAAGTGTTGCAAAATGTACTCTATGAGGATGACGATGACGATGATGAGCTTTAG 1329 0.4078 MATTQIQINSSTPFDEYEDWENNIHTPNSILMEEWQMVQKKGNKFVVNEQPFYVNGFNTYWLMVFAADESTRGRVTQVFKHASSVGMTVCRTWAFNDGQWRALQKSPSLYDEQVFKALDFVVTEAKKYRIRLILSLVNNWEAYGGKAQYVKWGNAAAGLNLTSDDDFFSHPTLRGYYKDHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDSSGDTLQEWIKEMAFYVKSVDPKHLLEIGLEGFYGPSTPQRFQFNPNSYAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSVADSHIPFVKSWMEAHIEDAEKYLGMPVVFGEFGVSAKDPGYNSTYRDTLINTVYKTILNSTKKGGSGAGSLLWQFFPDGTDYMDDGYAIVLSKAPSTSSMISLQSTRLALFNSLCSERCHWGCKKKKVLQNVLYEDDDDDDEL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0016 442 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 21 436 - -
Mal5g0016 442 SUPERFAMILY (Trans)glycosidases 37 392 IPR017853 -
Mal5g0016 442 PANTHER - 21 436 IPR045053 GO:0004553
Mal5g0016 442 Pfam Cellulase (glycosyl hydrolase family 5) 48 352 IPR001547 GO:0004553|GO:0071704
Mal5g0016 442 Gene3D Glycosidases 35 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0016 Mal-Chr5 372770 375081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0016 19 436 Glycoside Hydrolase AT5G01930 71.429 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0016 K19355 - gmx:100801139 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2506 3 96910694 96913191 Mal5g0016 5 372770 375081 PCT