Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2506 ATGGAGAAAATGGGAATACGTATTATTTTTTTATTCCTTCTTTTGATTCTAAGTTCTAATGCTTTTAGTATGGTGGATGAGGATGCACTAAAGGAAAGCCAAAATCATGTAGAAAATTCTATCACAAATTATGGGAGTGAAACAAAGTTGGAGATGGAAGAGGATGAATGGCAAATGGTGGGGAAGAAAGGAAACCAATTTGTGGTGAACAATCAACCTTTCTATATAAATGGATTCAACACATACTGGTTGATGATGTTTGCTATAGATGACTCCACCAGAGGAAAAGTCACAGAGGTTTTCAAACAAGCATCCTCACTAGGTATGACAGTTTGCAGAACTTGGGCTTTCAATGATGGCCAATGGCGGGCCCTACAGAAATCCCCTTCAGTCTACGATGAAGAAGTTTTCAAGGCCTTAGACTTTGTGGTAAGTGAAGCAAAGAAATTCAAAATCAGGCTGATATTATCATTGGCCAACAATTGGGAGGCATATGGTGGAAAAGCACAATATGTGAAATGGGGCAAAGATGCTGGCCTTAACTTGACCTCTGATGATGACTTCTTCTCACATTCAACCCTTAGAAGCTACTACAAGTCCCATGTTAAGACTGTGCTCAATAGAGTTAACACATTCACAAATATCACTTATAAGGAAGATCCTACCATTTTTGCATGGGAACTGATGAATGAGCCTAGATGCAACTCAGATCCCACAGGTGACAAGTTACAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAAATTGATCCAAAACACCTTTTGGAGATTGGACTAGAAGGATTTTATGGCCCTTCAACACCTCAGAGACTTCAATTCAATCCAAATACATATGCTCAACAGGTTGGAACTGATTTTATCAGGAACCATCAGGTTCTTGGTGTGGACTTTGCTTCTGTTCACATGTATGCTGACTCTTGGGTTTCACCGCAAATTTCTGATACACATATCTCATTTGTAAAATCATGGATGGATGCACACATCGAGGATGCTGAAAAGTACCTCGGAATGCCAGTTGTTTTTTCTGAGTTTGGTGTATCTTCCAAGGATCCTGGCTACAACTCAACATATAGAGACACACTAATAAGTACTGTGTACAGTTCCATCCTAAACTCCACAAAGAAAGGAGGGAGTGGTGCTGGAAGCCTTTTGTGGCAGGTGTTTCCTGAAGGAACAGATAATATGGATGACGGCTACGCTATTGTTTTCTCAAAATCTCCTTCCACTTCAAGTATTGTAACCCTTCAATCCACTAGGCTTGCTTTGTTCAACTCCTTGTGTTCTACCAGATGCAATTGGAGTTGTAAGAAGAAAAAAATGTTGGAGAAGATACTCTATCATGATGAACTCTAA 1377 0.3972 MEKMGIRIIFLFLLLILSSNAFSMVDEDALKESQNHVENSITNYGSETKLEMEEDEWQMVGKKGNQFVVNNQPFYINGFNTYWLMMFAIDDSTRGKVTEVFKQASSLGMTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKFKIRLILSLANNWEAYGGKAQYVKWGKDAGLNLTSDDDFFSHSTLRSYYKSHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCNSDPTGDKLQDWIQEMAFHVKKIDPKHLLEIGLEGFYGPSTPQRLQFNPNTYAQQVGTDFIRNHQVLGVDFASVHMYADSWVSPQISDTHISFVKSWMDAHIEDAEKYLGMPVVFSEFGVSSKDPGYNSTYRDTLISTVYSSILNSTKKGGSGAGSLLWQVFPEGTDNMDDGYAIVFSKSPSTSSIVTLQSTRLALFNSLCSTRCNWSCKKKKMLEKILYHDEL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2506 458 PANTHER - 8 458 IPR045053 GO:0004553
Mal3g2506 458 SUPERFAMILY (Trans)glycosidases 62 416 IPR017853 -
Mal3g2506 458 Pfam Cellulase (glycosyl hydrolase family 5) 70 373 IPR001547 GO:0004553|GO:0071704
Mal3g2506 458 Gene3D Glycosidases 57 431 - -
Mal3g2506 458 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 8 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2506 Mal-Chr3 96910694 96913191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2506 2 458 Glycoside Hydrolase AT5G01930 66.013 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2506 K19355 - gmx:100811794 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2506 3 96910694 96913191 Mal3g2506 3 96910694 96913191 ECH
Mal3g2506 3 96910694 96913191 Mal5g0016 5 372770 375081 PCT