Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0013 ATGGGGAACTGTGTGGCTAAGTCTCACTCCCAAACAAAAGATGATGATTCTGTTCACCGTGTGGAATTTGCTTCTGGAAATGTGCAACTTATTACTACCAAAGAATCTTGGAACCAAACGTTAGAACAAGCAAGGGGAGATGGAAAAATTGTCATTGCAAATTTCAGCGCTACGTGGTGTGGTCCTTGTAAGATAATTGCACCGTATTATTGTGAGTTATCAGAGAAATACCCTTCAATTATGTTCTTAGTAATTGATGTGGATGAACTAACTGAGTTCAGCACATCCTGGGACATTAAAGCCACACCAACTTTCTTCTTTCTGAGAGATGGACAAGAGATTGACAAACTGGTAGGAGCCAACAAACCAGAGCTGGAGAAGAAGATTGCTGCAGTGAATTCAGTTCCCCAGTATCAATAG 420 0.4095 MGNCVAKSHSQTKDDDSVHRVEFASGNVQLITTKESWNQTLEQARGDGKIVIANFSATWCGPCKIIAPYYCELSEKYPSIMFLVIDVDELTEFSTSWDIKATPTFFFLRDGQEIDKLVGANKPELEKKIAAVNSVPQYQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0013 139 SUPERFAMILY Thioredoxin-like 23 131 IPR036249 -
Mal5g0013 139 ProSitePatterns Thioredoxin family active site. 52 70 IPR017937 -
Mal5g0013 139 PANTHER THIOREDOXIN H9 8 134 - -
Mal5g0013 139 Pfam Thioredoxin 31 130 IPR013766 -
Mal5g0013 139 ProSiteProfiles Thioredoxin domain profile. 7 134 IPR013766 -
Mal5g0013 139 PANTHER THIOREDOXIN 8 134 - -
Mal5g0013 139 Gene3D Glutaredoxin 1 135 - -
Mal5g0013 139 PRINTS Thioredoxin family signature 51 59 - -
Mal5g0013 139 PRINTS Thioredoxin family signature 59 68 - -
Mal5g0013 139 PRINTS Thioredoxin family signature 98 109 - -
Mal5g0013 139 CDD TRX_family 39 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0013 Mal-Chr5 283842 286375 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0013 K03671 - gmx:100527258 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2510 3 97063647 97066770 Mal5g0013 5 283842 286375 PCT