Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2510 ATGGGGAACTGCTTGGCTAAGTCTCGGGATAGGGATAATGATTCTGATCAACATGTGGAGTTTGCTGCCGGGAATGTGGCACTTATTACCACCAAAGAATCTTGGGACCAAAAATTGGAAGAAGCACGAAAGGATGGCAAAATCGTGGTTGCAAATTTCAGTGCCGTGTGGTGCGGTCCTTGCAAGGTGATTGCGCCATATTACTGCGAGATGTCTGAGAAATACACATCTATGATGTTCTTATTAGTTGACGTGGATGAACTAACTGATTTCAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGACAACAACTTGACAAACTTGTAGGAGCAAACAAGCCAGAGCTTGAGAAGAAGCTTGTTGCCATTGCTGATTCAGTTCCTCAGAATAAGCAGTGA 420 0.4357 MGNCLAKSRDRDNDSDQHVEFAAGNVALITTKESWDQKLEEARKDGKIVVANFSAVWCGPCKVIAPYYCEMSEKYTSMMFLLVDVDELTDFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELEKKLVAIADSVPQNKQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2510 139 Pfam Thioredoxin 28 126 IPR013766 -
Mal3g2510 139 SUPERFAMILY Thioredoxin-like 22 130 IPR036249 -
Mal3g2510 139 CDD TRX_family 33 127 - -
Mal3g2510 139 ProSiteProfiles Thioredoxin domain profile. 17 132 IPR013766 -
Mal3g2510 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Mal3g2510 139 PANTHER THIOREDOXIN H9 1 137 - -
Mal3g2510 139 PRINTS Thioredoxin family signature 96 107 - -
Mal3g2510 139 PRINTS Thioredoxin family signature 57 66 - -
Mal3g2510 139 PRINTS Thioredoxin family signature 49 57 - -
Mal3g2510 139 Gene3D Glutaredoxin 1 138 - -
Mal3g2510 139 PANTHER THIOREDOXIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2510 Mal-Chr3 97063647 97066770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2510 K03671 - gmx:100813401 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2510 3 97063647 97066770 Mal3g2510 3 97063647 97066770 ECH
Mal3g2510 3 97063647 97066770 Mal5g0013 5 283842 286375 PCT